Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15]
81,467 sequences; 2,299,509,015 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq861 111 4e-19
seq182 86.0 1e-11
>seq861
Length=883633
Score = 111 bits (122), Expect = 4e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343
|||| ||||| || ||||| | || || | || ||||| | || || ||||| ||||
Sbjct 499600 CTTTCTGGATGTTGTAGTCAGAAAGAATGTGGCCATCTTCCAGCTGCTTGCCTGCAAAGA 499541
Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403
| || | ||| || | ||||| ||||||||||||||| | || || ||||| || |
Sbjct 499540 TGAGCCTCTGCTGGCCAGGGGGGATGCCTTCTTTATCCTGGGTCTTGGCCTTCACATTCT 499481
Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463
|| | |||||| | ||| | || || ||||| ||||| |||||||| ||||| ||||
Sbjct 499480 TCATGGTATCGCTGGGTTCCAACTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGA 499421
Query 288464 ATATCTGCATTATG 288477
| | ||| ||| ||
Sbjct 499420 AGACCTGTATTTTG 499407
>seq182
Length=2248111
Score = 86.0 bits (94), Expect = 1e-11
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 288313 CGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCT 288372
||||| || || | ||| | || ||||||||||| ||| ||| | || ||||||
Sbjct 678722 CGTCCATCGTCCAGTTGCTCGCCAGCGAAGATCAGTGTCTGCTGATCAGGAGGAATTCCT 678663
Query 288373 TCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGC 288432
|| ||||||||||| | || || ||| |||||| || ||| ||||| |||||||
Sbjct 678662 TCCTTATCCTGGATCTCGGCCTTTACGCTTTCTACAGTATCTGAGGATTCAACTTCGACA 678603
Query 288433 GTGATCGTCTTCCCGGTCAG 288452
||||| |||||||| ||||
Sbjct 678602 GTGATGGTCTTCCCCATCAG 678583
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178423081529626
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |