Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15]
81,467 sequences; 2,299,509,015 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq17 89.7 5e-13
>seq17
Length=4663558
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 9/227 (4%)
Strand=Plus/Plus
Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955
|| |||| ||||| || | || || || || || || ||||| || || |||||
Sbjct 4172522 AAGCGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGC 4172581
Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015
||| || |||||||| || || ||||||| | |||||| ||||| || |||||||||
Sbjct 4172582 CCATCTTCCAGCTGTTTCCCCGCAAAGATCAACCTCTGCTGGTCGGGGGGGATGCCCTCC 4172641
Query 127016 TTGTCC-GT--------GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|||||| || ||| ||| ||||| | |||| |||||| | ||| ||
Sbjct 4172642 TTGTCCTGTTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCGCTTGGCTCCACC 4172701
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | || || || |||| || || || || ||||||||
Sbjct 4172702 TCCAGGGTGATGGTCTTACCTGTCAAGGTCTTCACGAAGATCTGCAT 4172748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475016579704080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |