Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15] 81,467 sequences; 2,299,509,015 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq44 316 3e-81 seq3007 291 1e-73 seq41 203 4e-47 seq20533 127 3e-24 seq2145 84.2 3e-11 >seq44 Length=3743919 Score = 316 bits (350), Expect = 3e-81 Identities = 836/1264 (66%), Gaps = 22/1264 (2%) Strand=Plus/Plus Query 6896 GGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCA 6955 || ||||| || || ||| || | |||||||| | || || || || | || Sbjct 1640277 GGGATCGTGGTGTTCCTCTTGATGAGTGGGGTCATGACGCCGCCAGCCGTCTCAATGCCC 1640336 Query 6956 AGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCC 7015 || |||| || |||||||| | || | |||||| || || ||| | ||| ||| Sbjct 1640337 AGCGACAACGGGGTCACGTCGAGCAGCAGCAGGTCCTGCACG--TTCTCTGACTTGTCCC 1640394 Query 7016 -GTTAAG-ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCG 7073 | |||| ||||| || || |||| || ||||| || |||||||| |||||||| || Sbjct 1640395 CGATAAGGATGGCCGCCTGCACCGCGGCTCCGTAGGCCACCGCCTCGTCGGGGTTGATGC 1640454 Query 7074 TTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTC 7133 | || |||| || || ||||| ||| ||||| |||| | || || || ||||| | Sbjct 1640455 TCTTGTTCAACTCCTTGCCGTTGAAAAAATCCTGCAACAGCTTCTGGATCTTGGGGATGC 1640514 Query 7134 GTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTC 7193 | || || || || |||| ||||| || | | | || |||| ||| | ||| | Sbjct 1640515 GGGTGGAGCCCCCCACCAGCACGATCTCCTGGATCTGGCCCTTGTCGAGCTTGGCGTCAC 1640574 Query 7194 GAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAA 7253 | || | || || || || |||| | ||||||| ||| | || ||||| | Sbjct 1640575 GTAGCGCCTTCTCCACCGGCTCCAGGGTTCCGCGGAACAGGTCAGCATTGAGCTCCTCGA 1640634 Query 7254 AACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAA 7313 | || || ||||| ||||| || ||||| || ||||| ||||| | ||| || || || | Sbjct 1640635 AGCGGGCGCGGGTGATGGACGTGTAGAAGTCCACGCCCTCGTACAGCGAGTCGATCTCGA 1640694 Query 7314 TGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAAC 7373 || | | || | | ||| || || ||||| || ||||| ||||| || || | | Sbjct 1640695 TGCTCGCCTGCGTAGACGAGCTCAAGGTGCGCTTGGCTCGCTCGCACGCGGTGCGCAGTC 1640754 Query 7374 GACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAG 7433 | || | || ||| ||| ||| || ||||| || || || || ||||| || | Sbjct 1640755 GCCGCACTGCGCGCTTGTTGGGCCCAATGTCCTTCTTGTGCTTGCGCTTGAACTCCTCTG 1640814 Query 7434 AGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGG 7493 | ||| | | | | ||||| || || || |||| ||| || || || || | Sbjct 1640815 CCAGGTGGCTCACCATGCGGTTGTCGAAGTCCTCGCCGCCCAGGTGGGTGTCGCCGGCCG 1640874 Query 7494 TCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCAC 7553 | | || || || ||||| || | || ||| | | | || || || || || || | Sbjct 1640875 TGGACTTCACCTCGAAGATGCCGTCCTCGATGGTCAGGATGGACACGTCGAAGGTGCCGC 1640934 Query 7554 CACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG------TTCTTATCGAGAC 7607 | ||||||||||| ||||| |||||| | ||| || | | ||||| || |||| Sbjct 1640935 CGCCCAGGTCAAAGATGAGCACGTTCTTCTCGCCGCCGGCGCAGCCCTTCTTGTCCAGAC 1640994 Query 7608 CGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAA 7667 |||| || || |||||||| || || || || || || || || ||| ||||| | | Sbjct 1640995 CGTAGGCAATGGCCGCCGCGGTGGGCTCGTTGATGATGCGCAGCACGTTGAGGCCCGTGA 1641054 Query 7668 TAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTA 7727 | || |||| || || || || || || ||||| || || || ||||| || ||||| | Sbjct 1641055 TGGTGCCCGCGTCCTTGGTGGCCTGACGCTGCGAGTCATTGAAATAGGCAGGAACCGTGA 1641114 Query 7728 CGACCGCG-TCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTA 7786 ||||||| || | ||| | | || || || | ||| ||||| |||||||| || || Sbjct 1641115 TGACCGCGCTCTGCACCTTGCCT-CCCAGGTAGGCTTCGGCGATCTCTTTCATCTTAGTG 1641173 Query 7787 AGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAAC 7845 || ||||| || || ||||| || | | | | || || | || || || | || || Sbjct 1641174 AGGACCATGGAGGAGATCTCCTCTG-GGAAGAAGGTCTTGATCTCTCCCTTGTACTCCAC 1641232 Query 7846 TTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATC 7905 | | | |||| || | | | || | ||| ||| ||| | |||||| || Sbjct 1641233 CTGCACCTTGGGCTT---CCCTCCTTCGCTCACCACCCGGAACGGCCAGTGTTTCATGTC 1641289 Query 7906 GTCTTGGACCTGTTG-GTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTG 7964 || | |||| | |||| ||||| | |||||| || | ||| || || || | | Sbjct 1641290 CGACTGCA-CTGTGGCGTCCTCGAACTTCCGTCCGATCAGCCTCTTGGCGTCGAAGATGG 1641348 Query 7965 TGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTAT 8024 |||| ||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct 1641349 TGTTGGTGGGGTTCATGGCCACCTGGTTCTTGGCGGCGTCGCCGATCAGACGCTC---GG 1641405 Query 8025 TTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTT 8084 | || || || || ||||| ||||| || || || || |||||||| || || || | Sbjct 1641406 TGTCGGTGAAGGCCACGTAGCTGGGGGTGGTGCGGTTGCCCTGGTCGTTGGCGATGATCT 1641465 Query 8085 CTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGA 8144 | || | | | ||| |||| || |||||||| || || || || | || || |||| Sbjct 1641466 CCACCTTGCCATGTTGGAAGACCCCCACGCACGAGTAGGTGGTGCCCAGGTCGATGCCGA 1641525 Query 8145 TTGC 8148 | || Sbjct 1641526 TAGC 1641529 >seq3007 Length=51886 Score = 291 bits (322), Expect = 1e-73 Identities = 1025/1588 (65%), Gaps = 22/1588 (1%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| || |||||||||| || ||||| | ||||| || || || ||||| Sbjct 38317 TCATCCTCGGCTTTATACTTCTCAGCATCCAGAACCATGCGCTCGATCTCCTCTTTGCTC 38376 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||||||||| || || || ||||| | || || || | | ||| || Sbjct 38377 AGGCGGCCCTTATCATTGGTGATGGTGATCTTATTGGCCTTGCCTGTGCTCTTGTCCATG 38436 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || ||||||| | ||||||||| ||||||| || || | || | ||| || || Sbjct 38437 GCTGTTACATTGAGAATACCATTGGCATCAATGTCAAAGGTCACCTCAATCTGAGGCACT 38496 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 ||||| ||||| | || || || || | ||||| || || | ||||||| Sbjct 38497 CCCCTGGGTGCAGGAGGGATTCCAGTCAGGTCAAACCGCCCCAGGAGGTTGTTATCTCGG 38556 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | | | | || || ||||| || | || ||| |||| || |||||| Sbjct 38557 GTCATGGCTCTCTCGCCCTCATACACCTGGATCAATACCCCAGGCTGGTTATCTGAATAG 38616 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || | |||||| || | ||| | || || || | || | | || | ||| Sbjct 38617 GTGGTGAAGATCTGCGTCTGCTTGGTGGGGATGGTGGAGTTGCGCTTGATCAGGACTGTC 38676 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || | ||| || ||||| | || || |||| || | ||| ||||| | | ||| Sbjct 38677 ATGACACCTCCAGCCGTTTCCAACCCTAGGGACAAGGGAGCCACATCCAACAAAAGCAGA 38736 Query 6989 TCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTAT 7048 || || || ||| | || ||| | |||||||| || || || | ||||||||| Sbjct 38737 TCCTGTACCTTTTCAGACTTGTCCCCCATCAAGATGGCTGCCTGCACTGCCGCCCCGTAG 38796 Query 7049 GCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGAT 7108 || ||||||||||| ||||| || | || || || || ||| ||||| || ||| Sbjct 38797 GCTACCGCCTCATCAGGGTTGATGCTCTTGTTGAGATCACGACCATTAAAGTAGTCCTGC 38856 Query 7109 AACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACT 7168 | || |||| || ||||| || || || || || || || || || |||| | Sbjct 38857 AGCAGCCTCTGAACCTTAGGGATACGAGTGGAGCCCCCCACTAACACAATGTCATGGATC 38916 Query 7169 TTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA---TACATTTA 7225 || | ||||| ||||| | || ||||| | || || |||||||||| | | | || Sbjct 38917 TTAGCCTTATCCATCTTGGCATCCCGAAGAGCCTTCTCCACAGGTTCCAGAGTGCCTCTA 38976 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 |||| ||| ||||| || ||||| || || | ||| |||||||| ||||| ||| Sbjct 38977 ---AACAGGTCTGCACACAACTCTTCAAACCGGGCTCTGGTGATGGATGTGTAGAAGTCA 39033 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 | ||| || || | ||||||||||| | | | | || | | || || | || | | Sbjct 39034 ATGCCTTCATAAAGTGAATCAATTTCCAAGTTGGCCTGGGTGCTGGACGACAGGGTCCTC 39093 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 || || | ||| || || || || | || | | || ||| ||| | || || Sbjct 39094 TTGGCCCTCTCGCATGCGGTGCGCAGCCGCCTCACAGCTCGCTTGTTCTGGCTGATGTCC 39153 Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCT 7465 ||||| || || | || ||||| || |||||| | | || || ||| || ||| Sbjct 39154 TTCTTGTGCTTCCTCTTGAACTCCTCCACGAAGTGGCTCACCAGCCTGTTATCAAAGTCT 39213 Query 7466 TCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATG 7525 || || |||| ||| || ||||| || || || || || ||||| || || | || ||| Sbjct 39214 TCCCCTCCCAGGTGGGTGTCCCCGGCTGTGGCCTTTACCTCAAAAATTCCATCATCTATG 39273 Query 7526 TTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT-TCG-TAT 7583 | | | || |||||||| || || ||||| || ||||| || | |||| ||| | | Sbjct 39274 GTCAGGATGGACACATCAAATGTGCCTCCACCTAGATCAAAGATCAAGACGTGTCGCTCT 39333 Query 7584 CGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643 | | | | | ||||| | || || || || || || || || |||||||| |||| Sbjct 39334 CCCTGACCTGCT--TTATCTAAGCCATATGCAATGGCAGCAGCTGTGGGTTCATTGATAA 39391 Query 7644 TACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAA 7702 | | || ||| || || || ||||| | ||||| || || || || ||||| ||| Sbjct 39392 TTCTTAGCACA-TTGAGACCCGCAATCACACCTGCATCCTTGGTGGCCTGGCGTTGAGAA 39450 Query 7703 TCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGAT 7762 || || || ||||| || || || | || || | || || | || | | | | Sbjct 39451 TCATTGAAATAGGCTGGTACAGTGATCACTGCATTGGTAACAGGGTGGCCCAAAAAAGCC 39510 Query 7763 TCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG--CCGCAAACT 7820 || || | || ||||| || || || ||||| || || || || |||| | || || Sbjct 39511 TCAGCAGTCTCCTTCATCTTTGTCAGTACCATAGAAGAGATTTCCTCAGGATAGAAAGCT 39570 Query 7821 GTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAA 7880 ||| | || || || | || | | ||||||| || | | | ||||| Sbjct 39571 TTTT--TCTCCCCTTTGTATGACACCATTACCTTGGGTTT-GCCTC--CTTCATTGATAA 39625 Query 7881 CCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGA 7940 | | | | | |||| ||||||||| ||| || | || |||||| || || | Sbjct 39626 CTTGAAAAGGCCAAAGTTTCATATCTGATTGCACTACAGGATCATTAAACTTCCTGCCAA 39685 Query 7941 TAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCG 8000 | ||||| || |||||||| || ||||| | ||| |||||||| |||||||| || | Sbjct 39686 TCAGACGTTTGGCATCAAAGACAGTGTTCTGGGGATTCATGGCCACCTGGTTCTTGGCGG 39745 Query 8001 CGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGAT 8060 | |||||||| || || || | | || || || || || || ||||| || || | Sbjct 39746 CATCCCCGATGAGCCGCTC---AGTGTCGGTGAAGGCCACATAGCTGGGGGTGGTGCGGT 39802 Query 8061 TCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAAT 8120 | || |||||||| || || || || || | ||| || | || || ||||| || | Sbjct 39803 TGCCCTGGTCGTTGGCGATGATCTCCACCTTGCCGTGCTGGAACACCCCCACGCAGGAGT 39862 Query 8121 ACGTTGTTCCTAAATCAATACCGATTGC 8148 | || || || | ||||| ||||| || Sbjct 39863 AGGTGGTGCCCAGGTCAATGCCGATGGC 39890 Score = 230 bits (254), Expect = 3e-55 Identities = 777/1206 (64%), Gaps = 8/1206 (1%) Strand=Plus/Minus Query 6944 GTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCG 7003 || || || || || ||||| || | |||||||| || | |||||| || || || Sbjct 42964 GTCTCCAGCCCCAGCGACAGCGGAGCCACGTCCAGCAGCAGCAGGTCCTGCACGTTCTCA 42905 Query 7004 TTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCG 7063 | || ||| | | |||||| || || |||| ||||||||| || |||||||| || Sbjct 42904 GACTTGTCCCCCATCAGGATGGCCGCCTGCACCGCCGCCCCGTAGGCCACCGCCTCGTCC 42845 Query 7064 GGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATT 7123 || || || | || || || || ||||| || | || | || | || | Sbjct 42844 GGATTGATGCTCTTGTTGAGGTCGCGCCCGTTGAAGAAGTCTTGCAGCAGCTTCTGCACC 42785 Query 7124 TTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATC 7183 || ||||| || || || || || |||| || | || | | | | || || | | Sbjct 42784 TTGGGGATGCGGGTGGAGCCCCCCACCAGGACCAGGTCGTGGATCTGGGCCTTGTCCAGC 42725 Query 7184 TTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACAC 7243 || | ||| || || | || || || || |||| | ||||||| ||| ||| Sbjct 42724 TTGGCGTCGCGCAGCGCCTTCTCCACCGGCTCCAGGGTGCTCCGGAACAGGTCGGAGCAC 42665 Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || ||||| || || || | ||| ||||| || ||||| || | ||| ||| | | || Sbjct 42664 AGCTCCTCGAACCGCGCCCTGGTGATGGACGTGTAGAAGTCGATGCCCTCGAACAGGGAG 42605 Query 7304 TCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCC 7363 || || || | | | | || | | || || | || | ||| || | ||| || || Sbjct 42604 TCGATCTCCAGGCTGGCCTGCGTGCTGGACGACAGGGTCCTCTTGGCCCTCTCGCAGGCG 42545 Query 7364 GTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTA 7423 || || | || | | ||| ||| ||| | || || ||||| || || | || Sbjct 42544 GTGCGCAGCCGCCTCACGGCTCGCTTGTTCTGGCTGATGTCCTTCTTGTGCTTCCTCTTG 42485 Query 7424 AACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTA 7483 ||||| || |||||| | || || ||| || || || || |||| ||| || Sbjct 42484 AACTCCTCCACGAAGTGGTTCACCAGCCTGTTATCAAAGTCCTCGCCTCCCAGGTGGGTG 42425 Query 7484 TCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCA 7543 ||||| || || || || || || ||||| || | || || | | | || || || Sbjct 42424 TCCCCGGCCGTGGCCTTCACCTCGAAGATGCCGTCGTCGATCGTCAGGATGGACACGTCG 42365 Query 7544 AACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCG 7603 || || || || ||||||||||| ||||| ||||| || | | | || | || Sbjct 42364 AAGGTGCCGCCGCCCAGGTCAAAGATGAGCACGTTACGCTCCCCCTTGCCGGTCCTGTCC 42305 Query 7604 AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCA 7663 || ||||| ||||| || || ||||| || || || || || | || |||||| || Sbjct 42304 AGGCCGTAGGCGATGGCGGCGGCCGTGGGCTCGTTGATGATCCTCAGCACGTTCAGCCCC 42245 Query 7664 GCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACC 7723 || || |||| || || || || || || ||||| ||||| ||||||||||| || Sbjct 42244 GCGATCACCCCCGCGTCCTTGGTGGCCTGGCGCTGCGAGTCGTTGAAGTAGGCCGGCACG 42185 Query 7724 GTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTG 7783 || | ||||||| || || | || || |||| || ||||| || ||||| ||| Sbjct 42184 GTGATCACCGCGTTGGTCACCGGGTAGCCCAGGTACGCCTCGGCGATCTCCTTCATCTTG 42125 Query 7784 GTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTT-AAAATC 7842 || || ||||| || || ||||| || | ||| || || || || || | || Sbjct 42124 GTCAGCACCATGGACGAGATCTCCTCGGGGTAGAACGCCTTGGTCTCCCCCTTGTAGCTC 42065 Query 7843 AACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCAT 7902 | || | | | |||| |||||| | || ||| |||| | | ||| | ||||| Sbjct 42064 ACCTGC-ACCTTGGGCTTATCC---CCGTCGTTGATCACCTGGAAAGGCCAGTGCTTCAT 42009 Query 7903 ATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAAC 7962 || || ||| |||| ||||| | ||||| || ||||| || || || || Sbjct 42008 GTCCGACTGCACCACCGGGTCGCCGAACTTGCGGCCGATCAGCCGCTTCGCGTCGAACAC 41949 Query 7963 TGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATT 8022 ||||| | ||||||| || |||||||| ||||| |||||||| || || || Sbjct 41948 CGTGTTCTGCGGGTTCAGCGCCACCTGGTTCTTGGCCGCATCCCCGATGAGCCGCTC--- 41892 Query 8023 ATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAAT 8082 | || || || || ||||| ||||| || || || || |||||||| || || || Sbjct 41891 GGTGTCGGTGAAGGCCACGTAGCTGGGGGTGGTGCGGTTGCCCTGGTCGTTGGCGATGAT 41832 Query 8083 TTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACC 8142 || || | ||| || | || || ||||| || || || || || | || || || Sbjct 41831 CTCCACCTTGCCGTGCTGGAACACCCCCACGCAGGAGTAGGTGGTGCCCAGGTCGATGCC 41772 Query 8143 GATTGC 8148 ||| || Sbjct 41771 GATGGC 41766 >seq41 Length=3861741 Score = 203 bits (224), Expect = 4e-47 Identities = 369/540 (68%), Gaps = 0/540 (0%) Strand=Plus/Plus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || || || || |||||||| ||||| || | |||||||||||||| ||||| ||| Sbjct 3280910 GCACCATAAGCAACAGCCTCATCAGGGTTGATGCTCTTATTCAGTTCTTTTCCGTTGAAA 3280969 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 |||| || | || ||||| || ||||| || || || ||||| |||| || || Sbjct 3280970 AAATCTTGTAGAAGTTTCTGAATCTTGGGGATACGGGTAGAACCACCCACCAGGACAATA 3281029 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 || | | | || || || | ||| | || ||||| | ||| || ||||| |||| Sbjct 3281030 TCGTGGATCTGAGACTTGTCTAGCTTGGCATCCCGAAGGGCTTTCTCTACAGGGTCCAGG 3281089 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||||| ||| | | ||| ||||| || ||||| ||||| || |||||| Sbjct 3281090 GTGCCACGGAACAGGTCAGCATTTAATTCTTCAAAGCGGGCACGAGTAATAGAGGTATAG 3281149 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || || | || || || | |||||||| ||||| | | || | | ||||| | Sbjct 3281150 AAGTCGATTCCTTCATACAGAGAATCAATCTCAATACTGGCCTGGGTGCTGGAAGAAAGT 3281209 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || || ||||| || || || | |||||||| || | | ||| | Sbjct 3281210 GTACGCTTAGCACGTTCACAAGCAGTACGGAGACGACGAACTGCCCTCTTGTTTTCACTG 3281269 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459 || || ||||||||||| ||||| |||||| || || || | | || ||| Sbjct 3281270 ATGTCCTTCTTATGTTTGCGTTTGAACTCTGCAATAAAATGGTTGACCATTCGGTTATCA 3281329 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 || ||||| ||||| || || || || || || || | |||||| || ||||| || || Sbjct 3281330 AAGTCTTCTCCACCTAAATGAGTGTCTCCAGCTGTGGATTTGACCTCGAAGATTCCATCT 3281389 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 ||||| | | | || |||||||| || ||||| || | |||||| || || || ||| Sbjct 3281390 TCAATAGTAAGGATAGACACATCAAAAGTGCCACCTCCTAAGTCAAAGATCAGCACATTC 3281449 Score = 89.7 bits (98), Expect = 7e-13 Identities = 136/193 (70%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 7956 CAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGAC 8015 ||||||||||||| |||||||||| || ||| ||||| || || || ||||| | | Sbjct 3282475 CAAAAACTGTGTTGGTGGGGTTCATCGCAACTTGATTCTTTGCGGCATCACCGATCAATC 3282534 Query 8016 GTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCG 8075 |||| | | || || || ||||| || |||||| ||||| || || || || || | Sbjct 3282535 GTTC---AGTGTCAGTGAAAGCGACATAACTTGGGGTGGTTCGGTTTCCCTGATCATTGG 3282591 Query 8076 CAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAAT 8135 |||| ||||| || ||| || |||| || || || || || || || || | || Sbjct 3282592 CAATTATTTCCACTTTCCCGTGCTGGAAGACACCCACACAAGAGTAGGTGGTGCCAAGAT 3282651 Query 8136 CAATACCGATTGC 8148 |||| || | ||| Sbjct 3282652 CAATGCCAACTGC 3282664 Score = 82.4 bits (90), Expect = 1e-10 Identities = 97/129 (75%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 7607 CCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGC 7665 || || || ||||| || || ||||| ||||| || || | ||| ||| || || ||||| Sbjct 3281583 CCATAAGCAATAGCAGCAGCAGTTGGCTCATTGATGATTCTAAGTACA-TTGAGACCAGC 3281641 Query 7666 AATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGT 7725 ||||||| | |||||||| || || || || || || || || |||||||| || || || Sbjct 3281642 AATAGTTCCAGCATCTTTGGTAGCCTGACGCTGAGAGTCATTGAAGTAGGCAGGTACTGT 3281701 Query 7726 TACGACCGC 7734 || || || Sbjct 3281702 GACAACTGC 3281710 >seq20533 Length=487 Score = 127 bits (140), Expect = 3e-24 Identities = 311/468 (66%), Gaps = 5/468 (1%) Strand=Plus/Plus Query 7553 CCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTAC 7612 || ||||||||||| ||||| ||||| || | | | || | || || ||||| Sbjct 2 CCGCCCAGGTCAAAGATGAGCACGTTACGCTCCCCCTTGCCGGTCCTGTCCAGGCCGTAG 61 Query 7613 GCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTT 7672 ||||| || || ||||| || || || || || | || |||||| || || || Sbjct 62 GCGATGGCGGCGGCCGTGGGCTCGTTGATGATCCTCAGCACGTTCAGCCCCGCGATCACC 121 Query 7673 GCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACC 7732 |||| || || || || || || ||||| ||||| ||||||||||| || || | ||| Sbjct 122 CCCGCGTCCTTGGTGGCCTGGCGCTGCGAGTCGTTGAAGTAGGCCGGCACGGTGATCACC 181 Query 7733 GCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACC 7792 |||| || || | || || |||| || ||||| || ||||| ||||| || ||| Sbjct 182 GCGTTGGTCACCGGGTAGCCCAGGTACGCCTCGGCGATCTCCTTCATCTTGGTCAGCACC 241 Query 7793 ATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTT-AAAATCAACTTCAAT 7851 || || || ||||| || | ||| || || || || || | ||| || | | Sbjct 242 ATGGACGAGATCTCCTCGGGGTAGAACGCCTTGGTCTCCCCCTTGTAGCTCACCTGC-AC 300 Query 7852 CATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTG 7911 | |||| |||||| | || ||| |||| | | ||| | ||||| || || Sbjct 301 CTTGGGCTTATCC---CCGTCGTTGATCACCTGGAAAGGCCAGTGCTTCATGTCCGACTG 357 Query 7912 GACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTT 7971 ||| |||| ||||| | ||||| || ||||| || || || || ||||| | Sbjct 358 CACCACCGGGTCGCCGAACTTGCGGCCGATCAGCCGCTTCGCGTCGAACACCGTGTTCTG 417 Query 7972 GGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTC 8019 ||||||| || |||||||| ||||| |||||||| || || || Sbjct 418 CGGGTTCAGCGCCACCTGGTTCTTGGCCGCATCCCCGATGAGCCGCTC 465 >seq2145 Length=221707 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/150 (73%), Gaps = 3/150 (2%) Strand=Plus/Plus Query 6566 TTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTC 6625 || ||||||||| |||| ||||| || || || |||||||| | ||||||||||| || Sbjct 48627 TTCTCATCTTCAGCTTTGTACTTCTCAGCTTCCTGGACCATGTGCTCAATGTCTTCCTTA 48686 Query 6626 GATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCT 6685 || | ||||| || || || || ||||||||||| ||| | | | |||||| Sbjct 48687 CTCAAGCGGCCCTTGTCGTTAGTGATGGTAATCTTTTC---TTTCCTTGTGCTCTTATCC 48743 Query 6686 TCAGCACTTACATTCAAAATACCATTTGCA 6715 ||||| ||||| | |||||||| ||| Sbjct 48744 ACAGCAGAGACATTAAGGATACCATTAGCA 48773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634486020452280