Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15]
81,467 sequences; 2,299,509,015 total letters
Query= NC_016448.1
Length=196691
Score E
Sequences producing significant alignments: (Bits) Value
seq1523 105 8e-18
>seq1523
Length=452193
Score = 105 bits (116), Expect = 8e-18
Identities = 160/227 (70%), Gaps = 3/227 (1%)
Strand=Plus/Plus
Query 2228 CAATCACAGTCAACTGTCTCAGAATCGGATCTGCGAGATCCATCTGACCTGTTCTGTCGA 2287
|||||||| | |||||| ||| | ||| ||| ||||| || |||||||| ||||| ||
Sbjct 209271 CAATCACACTAGGCTGTCTGAGATTGGGACCTGTGAGATACACCTGACCTGCTCTGTGGA 209330
Query 2288 GGATCCCAATGACAACATCTCCTTCAAATGGGAGGCCTTGGGCAAGACGCTTCTACGCGA 2347
| || | ||||||| | | | | | ||| | | | || || || || ||
Sbjct 209331 GAATTCAAATGACAGCTTGT---TAAGGTGGCACGTGGTAGGAAACACATCCATAAATGA 209387
Query 2348 GCCCAACCTCACGACCTCCTGGGACCCCAGGAACAGCAGTGAGCAGAACTACACGTGCAT 2407
| |||||||| |||||||||||||||||| |||||| ||||| ||||| |||||
Sbjct 209388 AGCAAACCTCACTGTCTCCTGGGACCCCAGGAATTCCAGTGACCAGAAGTACACCTGCAT 209447
Query 2408 CGCCGAAAACGCTGTGAGCAATCTCTCTTTCACGGTCTCGGCCCAGA 2454
|| || || |||| ||||| | || ||| | ||||| ||||||
Sbjct 209448 AGCTGAGAATCCTGTCAGCAACATATCCTTCTCTGTCTCCACCCAGA 209494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628642377319320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |