Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15]
81,467 sequences; 2,299,509,015 total letters
Query= NC_024303.1
Length=144898
Score E
Sequences producing significant alignments: (Bits) Value
seq497 93.3 4e-14
seq847 82.4 7e-11
>seq497
Length=1337528
Score = 93.3 bits (102), Expect = 4e-14
Identities = 114/153 (75%), Gaps = 2/153 (1%)
Strand=Plus/Minus
Query 21123 CTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGC 21182
||||||| ||||| || | || || ||| | ||| ||||||| |||| || || |||
Sbjct 575592 CTAGCATATGGGGACCAACATGTGACGGCCTGGATCGCATTGTCGAGCGCTGCGACTTGC 575533
Query 21183 CAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCA 21242
| ||| | || |||||||| ||| | | |||||||||||||| ||||||| || | |
Sbjct 575532 CCGAGATGCACGTGGGCGATTGGATGGTCTTTGAAAACATGGGTGCTTACA-CTGTGGCT 575474
Query 21243 GCT-CTTCAACCTTTAACGGCTTCCCAAAGCCA 21274
||| |||| ||||| || || |||| | ||||
Sbjct 575473 GCTGCTTCGACCTTCAATGGATTCCAGAGGCCA 575441
>seq847
Length=894766
Score = 82.4 bits (90), Expect = 7e-11
Identities = 127/178 (71%), Gaps = 4/178 (2%)
Strand=Plus/Plus
Query 20324 AAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGTTA 20383
||| ||||||||||||| | | | |||||||||||||| ||| || || || ||
Sbjct 49370 AAGCCCCTAGCTGCCCTGAGACA--GATTTGACTGTGCCAGCAAGACTGAAATACAATTG 49427
Query 20384 CTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCAGCCT 20443
| || | ||| | || | |||| ||||| | | ||| |||||||||||||
Sbjct 49428 -TACAGAGTCTCAGGGTGCCTCCAGAGAGGATTATCTATGCAAATCCTTGTAAGCGAGTG 49486
Query 20444 TCGCATATAACGTATGCCGCTCAAACTGGAGTAAGGCTGATGACTTTTGATAGTGAAG 20501
|| || || | ||||| || ||| |||||| | |||||||||||||||||||||
Sbjct 49487 TCTCAGATTAA-TATGCTGCCAAAAATGGAGTCCAGATGATGACTTTTGATAGTGAAG 49543
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 463073554132560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |