Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15] 81,467 sequences; 2,299,509,015 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq590 93.3 1e-13 >seq590 Length=1172511 Score = 93.3 bits (102), Expect = 1e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 131857 AAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTAT 131916 |||| | || ||||||||| ||| ||||| || ||||| || || |||| |||||| Sbjct 827108 AAGAGTGGTGGCTTTTGCTGCTGTAGAAGGGATTTTCTTCTCGGGATCTTTTGCTGCTAT 827167 Query 131917 CTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTC 131976 || ||||| ||||| | || | |||||||||||| | || |||||| || ||||| Sbjct 827168 ATTCTGGCTAAAGAAAAGAGGTCTTATGCCTGGACTCACGTTTTCCAATGAACTCATCAG 827227 Query 131977 GAGAGATGAAG 131987 |||||||||| Sbjct 827228 CAGAGATGAAG 827238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1185574009620787