Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15]
81,467 sequences; 2,299,509,015 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq456 100 7e-16
>seq456
Length=1409724
Score = 100 bits (110), Expect = 7e-16
Identities = 139/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| |||| ||||| |||||| ||||
Sbjct 1114110 AAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAGAAT 1114169
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| ||||| || || || ||| || || || |||||
Sbjct 1114170 GTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCAGCAGAGGCTCATCTTT 1114229
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| |||||||||| | ||| | | ||||||||| |||||||||||||
Sbjct 1114230 GCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCG 1114289
Query 206365 ACTCTTCACCTTGTT 206379
||||| ||||| |||
Sbjct 1114290 ACTCTCCACCTGGTT 1114304
Score = 93.3 bits (102), Expect = 1e-13
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| |||| ||||| |||||| ||||
Sbjct 1113198 AAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAGAAT 1113257
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| ||||| || || || ||| || || || |||||
Sbjct 1113258 GTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCAGCAGAGGCTCATCTTT 1113317
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| |||||||||| | ||| | | ||||||||| |||||||||||||
Sbjct 1113318 GCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCG 1113377
Query 206365 ACTCTTCACCTTGT 206378
|| || ||||| ||
Sbjct 1113378 ACCCTGCACCTGGT 1113391
Score = 93.3 bits (102), Expect = 1e-13
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| |||| ||||| |||||| ||||
Sbjct 1113426 AAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAGAAT 1113485
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| ||||| || || || ||| || || || |||||
Sbjct 1113486 GTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCAGCAGAGGCTCATCTTT 1113545
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| |||||||||| | ||| | | ||||||||| |||||||||||||
Sbjct 1113546 GCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCG 1113605
Query 206365 ACTCTTCACCTTGT 206378
|| || ||||| ||
Sbjct 1113606 ACCCTGCACCTGGT 1113619
Score = 93.3 bits (102), Expect = 1e-13
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| |||| ||||| |||||| ||||
Sbjct 1113654 AAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAGAAT 1113713
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| ||||| || || || ||| || || || |||||
Sbjct 1113714 GTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCAGCAGAGGCTCATCTTT 1113773
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| |||||||||| | ||| | | ||||||||| |||||||||||||
Sbjct 1113774 GCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCG 1113833
Query 206365 ACTCTTCACCTTGT 206378
|| || ||||| ||
Sbjct 1113834 ACCCTGCACCTGGT 1113847
Score = 93.3 bits (102), Expect = 1e-13
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| |||| ||||| |||||| ||||
Sbjct 1113882 AAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAGAAT 1113941
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| ||||| || || || ||| || || || |||||
Sbjct 1113942 GTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCAGCAGAGGCTCATCTTT 1114001
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| |||||||||| | ||| | | ||||||||| |||||||||||||
Sbjct 1114002 GCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCG 1114061
Query 206365 ACTCTTCACCTTGT 206378
|| || ||||| ||
Sbjct 1114062 ACCCTGCACCTGGT 1114075
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1180587220250107
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |