Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15] 81,467 sequences; 2,299,509,015 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq858 114 2e-20 >seq858 Length=884820 Score = 114 bits (126), Expect = 2e-20 Identities = 161/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 214001 ATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTTTACGAA 214060 ||||| || || || || ||||| || ||||| || | | ||| | ||| | ||| | Sbjct 462384 ATTGATGGAGAGGTGTATCCTCCCACAGTCAAAGATACTCAGGTGGAGATGATCTACCCA 462325 Query 214061 CCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTCGTGCCC 214120 ||| ||||||||| | |||| || || |||| | || | || || || ||||| Sbjct 462324 CCCCATGTTCCCGAACACCTACGGTTTGCCGTGGGCCAGGAAGTTTTCGGGCTGGTGCCT 462265 Query 214121 GGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACGTGCTG 214180 ||| | ||| |||| |||| || ||| || | || || ||||| || || || ||||| Sbjct 462264 GGTCTGATGATGTATGCCACGATTTGGTTGCGGGAACATAACAGAGTGTGTGATGTGCTT 462205 Query 214181 AAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGATCA 214226 ||||| |||||||| || ||| | || || | ||||||||||| || Sbjct 462204 AAACAGGAGCACCCAGAGTGGGATGATGAGCGGCTGTTCCAGACCA 462159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 722604194938080