Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailuropoda_20melanoleuca_20[refseq_20GCF_5F000004335.2_202009-12-15]
81,467 sequences; 2,299,509,015 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq810 163 4e-35
>seq810
Length=940331
Score = 163 bits (180), Expect = 4e-35
Identities = 255/363 (70%), Gaps = 4/363 (1%)
Strand=Plus/Plus
Query 13682 GGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTT 13741
|||||||| ||||||||||| ||||| || || ||| | |||||||| ||||| ||| |
Sbjct 564622 GGAAGAGGCGGAGTTTCCCATAGCCTATTCCATAGTGGTTCACCACAAAATCGAAATGCT 564681
Query 13742 CGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTC 13801
|| || |||||||||||||||||| || ||||| |||||||| | |||||||||
Sbjct 564682 TGACCGGCTCCTGAGGGCCATCTACATGCCCCAGAATTTCTACTGCATTCACGTGGACAG 564741
Query 13802 CAAGTCCGGCGA--CGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAAC 13859
||||| | ||| || || ||| || | | | |||||| |||||| ||||
Sbjct 564742 AAAGTCAGCCGATTCGTTTTTGGCCGCGGTGATT--GGCATCGCGTCCTGCTTCAGTAAC 564799
Query 13860 GTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCC 13919
|| ||||| | |||| | |||||||| | ||| |||||||| || ||||||
Sbjct 564800 GTCTTTGTGGCCAGTCAGCTGGAGAGTGTGGTGTATGCCTCTTGGAGTCGGGTTCAGGCC 564859
Query 13920 GACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAAC 13979
||||||| ||||||| ||| | || | | |||| |||| || | ||
Sbjct 564860 GACCTCAACTGCATGCAAGACGTCTACAGGATGAGTGCGGACTGGAAGTACTTGATAAAT 564919
Query 13980 CTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGCC 14039
|| ||||| |||||||| || | || |||||| |||| || || | | ||| ||| |
Sbjct 564920 CTTTGCGGTATGGACTTTCCTATTAAAACCAACTTGGAAATTGTCCAGAAGCTCAAGTCG 564979
Query 14040 CTG 14042
|||
Sbjct 564980 CTG 564982
Score = 87.8 bits (96), Expect = 2e-12
Identities = 186/274 (68%), Gaps = 8/274 (3%)
Strand=Plus/Plus
Query 14277 GACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTACGGGACGCCC 14336
|||||||||||||| || ||| | || |||||||| | ||||| || | || | ||
Sbjct 565214 GACACGTACAGCCCGGATGAGTATCTCTGGGCCACTATCCAGAGGATC--CCTGATGTCC 565271
Query 14337 GGGGGGATCCCCGTTC--ACGTCA--AGTACGACACCTCGGACATGTGGGCCAAGGTCAG 14392
||| |||| || | | | || |||| |||| || |||||| || | | ||
Sbjct 565272 CGGGC--TCCCTGTCCCTAAGCCAGAAGTATGACATGTCCGACATGCACGCGATTGCAAG 565329
Query 14393 GTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCGCCTTG 14452
||||||||| ||||| |||| ||| || ||| | || || |||| ||||| || ||
Sbjct 565330 GTTCGTCAAATGGCAGTACTTCGAAGGTGATGTTTCCAAGGGTGCCCCCTACCCACCCTG 565389
Query 14453 CGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGGCTGAA 14512
| | || ||||||| | | | ||| | ||||| | || ||| |||| ||| ||
Sbjct 565390 CAATGGGGTCCACGTGCGTTCTGTGTGCGTGTTCGGAGCAGGTGACTTGAACTGGATGTT 565449
Query 14513 GAGCGTCCCGCACCTGTTCGCCAACAAGTTCGAC 14546
|| | ||| |||| ||||||||||| |||
Sbjct 565450 ACGCAAGCATCACTTGTTTGCCAACAAGTTTGAC 565483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658068381169920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |