Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq26 91.5 1e-13 >seq26 Length=7528108 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/216 (69%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 |||||| |||||||| ||||| | ||||| || ||||| || | | |||||| | Sbjct 6810585 AATGCAGATATTCATGAAAACCCTAACGGGGAAGACCATCACTCTCAAGGTTGAACCCTC 6810644 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | || | ||| || ||| ||||| ||||| | || ||||| Sbjct 6810645 GGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCCGATCA 6810704 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT---TCCAAAACTATGGCCGATTA 29137 || || || |||||||| ||||| |||||||||||| | | ||| || | || || Sbjct 6810705 GCAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTACTTTGTCTGACTA 6810764 Query 29138 CAATATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 ||| ||||| ||||| || |||||||| | ||||| Sbjct 6810765 CAACATTCAAAAGGAGTCCACTCTTCAGCTTGTGTT 6810800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428275501421795