Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq56 143 2e-29
seq101 131 1e-25
seq292 107 2e-18
seq1820 91.5 1e-13
>seq56
Length=5723395
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
||||||| || | |||||||| |||| |||||||||||| || || || ||||| | |
Sbjct 4239156 CCCCCTCTGAGGCGGAGCACCAGGTGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGAC 4239215
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | | || ||||||||||| |||||| | || || ||||||||||| |||
Sbjct 4239216 AGGGTGCGCCCATCTTCCAGCTGTTTCCCCGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 4239275
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| || ||||| |||||| || || | ||| || |||| |||||||
Sbjct 4239276 ATGCCCTCTTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 4239335
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| ||| |||||||||||||| || || || || || || |||||
Sbjct 4239336 TCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4239382
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
||||||| || | |||||||| |||| ||||||||||| || ||||| ||||| | |
Sbjct 4239384 CCCCCTCTGAGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4239443
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | | || ||||||||||| |||||| | || || ||||||||||| |||
Sbjct 4239444 AGGGTGCGCCCATCTTCCAGCTGTTTCCCCGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 4239503
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| || ||||| |||||| || || | ||| || |||| |||||||
Sbjct 4239504 ATGCCCTCTTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 4239563
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| ||| |||||||||||||| || || || || || || |||||
Sbjct 4239564 TCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4239610
Score = 141 bits (156), Expect = 8e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
||||||| || | |||||||| |||| ||||||||||| || ||||| ||||| | |
Sbjct 4239612 CCCCCTCTGAGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4239671
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | | || ||||||||||| |||||| | || || ||||||||||| |||
Sbjct 4239672 AGGGTGCGCCCATCTTCCAGCTGTTTCCCCGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 4239731
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| || ||||| |||||| || || | ||| || |||| |||||||
Sbjct 4239732 ATGCCCTCTTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 4239791
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|||| ||| |||||||| ||||| || || || || || || ||||||
Sbjct 4239792 TCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCATT 4239839
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032
|||| |||||||||||| || ||||| ||||| | |||||| | | || |||||||||
Sbjct 4238952 TGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGT 4239011
Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092
|| || ||| | || || ||||||||||| ||| | ||| || || || ||||||
Sbjct 4239012 TTCCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTTTCTTGGATCTTC 4239071
Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152
||| || | ||| || |||| ||||||| |||| ||| ||||||||||||||
Sbjct 4239072 CCTTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTC 4239131
Query 21153 AACGTTTTGACAAATATTTGCAT 21175
|| || || || || || |||||
Sbjct 4239132 AAGGTCTTCACGAAGATCTGCAT 4239154
>seq101
Length=4626942
Score = 131 bits (144), Expect = 1e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
|| |||| ||||| ||||||||| || || ||||| || || | || || || | ||
Sbjct 1982539 AGGACCAGATGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 1982598
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|||||||| ||||| ||| ||||||| ||||||||||| ||| | ||| ||||| ||
Sbjct 1982599 TCCAGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCC 1982658
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|||||| ||||| | ||| || |||| ||| ||| ||||| ||| ||||||
Sbjct 1982659 TGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTC 1982718
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||||||| | || || || || || |||||
Sbjct 1982719 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1982750
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| ||| | || |||| ||||| |||||||| ||||| ||||| || || |
Sbjct 1982752 CCACCTCTCAGGCGCAGGACCAGATGCAGGGTGGACTCTTTTTGGATGTTGTAATCAGAA 1982811
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || | || |||||||| ||||| ||| ||||||| ||||||||||| |||
Sbjct 1982812 AGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGGG 1982871
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| ||||| || |||||| ||||| | ||| || || | ||| ||| |
Sbjct 1982872 ATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCGCTGGGTTCCACT 1982931
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| ||| |||||||||||||| | || || || || || |||||
Sbjct 1982932 TCCAGGGTTATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1982978
Score = 125 bits (138), Expect = 6e-24
Identities = 158/217 (73%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
|| |||| ||||| |||||||| || || ||||| || || | || || || | ||
Sbjct 1982995 AGGACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 1983054
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|||||||| ||||| ||| ||||||| ||||||||||| ||| | ||| ||||| ||
Sbjct 1983055 TCCAGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCT 1983114
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|||||| ||||| | ||| || |||| ||| ||| |||| ||| ||||||
Sbjct 1983115 TGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGTTCCACCTCCAGGGTGATGGTC 1983174
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180
||||| || | || || || || || ||||||||||
Sbjct 1983175 TTGCCAGTCAGGGTCTTCACGAAGATCTGCATTTTGA 1983211
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
|| |||| || | ||| ||||| || || ||||| || || | || || || | ||
Sbjct 1982311 AGAACCAGGTGGAGAGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 1982370
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|||||||| ||||| ||| ||||||| ||||||||||| ||| | ||| ||||| ||
Sbjct 1982371 TCCAGCTGCTTGCCAGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCT 1982430
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|||||| ||||| | ||| ||||||| |||||| ||| | ||| ||||||
Sbjct 1982431 TGGATCTTGGCCTTCACATTTTCGATGGTATCACTGGGCTCTACTTCTAGGGTGATGGTC 1982490
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||||||| | || || || || || |||||
Sbjct 1982491 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1982522
>seq292
Length=3256830
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||| |||||||| || || || || || || | ||| || || | ||
Sbjct 1957756 AGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAATCAGACAGAGTGCGGCCATCT 1957815
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|||||||||||||||||| |||| || | ||||||||| ||| | ||| ||||| ||
Sbjct 1957816 TCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCT 1957875
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||| || ||| || | | | || |||| |||||| || | ||| ||||||
Sbjct 1957876 TGGATTTTGGCTTTAACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 1957935
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||||| || | || || ||||| || |||||
Sbjct 1957936 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1957967
>seq1820
Length=90317
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022
||| |||| || | ||| ||||| || || | ||| || || | || || || | ||
Sbjct 66967 GAGTACCAGGTGGAGAGTCGACTCTTTCTGGAGGTTGTAATCAGAAAGAGTGCGGCCATC 66908
Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082
|||||||| ||||| ||| | ||||| ||||||||||| | | | || || || ||
Sbjct 66907 TTCCAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGTCGGGGCGGATGCACTCTTTATC 66848
Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142
|||||| ||||| ||| || |||| ||| ||| |||| ||| |||||
Sbjct 66847 TTGGATCTTGGCCTTCACAGTTTCGATTGTGTCACTGGGTTCCACCTCCAGGGTGATGGT 66788
Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180
|||||| || | || || || || || ||||||||||
Sbjct 66787 CTTGCCAGTCAGTGTCTTCACGAAAATCTGCATTTTGA 66750
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422199559714724
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