Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq292 149 5e-31
seq101 113 4e-20
seq694 96.9 3e-15
seq517 96.9 3e-15
seq695 95.1 1e-14
seq1820 93.3 4e-14
seq26 86.0 5e-12
>seq292
Length=3256830
Score = 149 bits (164), Expect = 5e-31
Identities = 159/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || |||||||| || || |||||||| || |||||| ||| ||
Sbjct 1957758 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAATCAGACAGAGTGCGGCCATCTTC 1957817
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||||| || || | || ||||||||||| ||||| || ||||||||||| |||
Sbjct 1957818 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCTTG 1957877
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||||| |||||| | || | |||||| || ||||||||||| ||| | || ||
Sbjct 1957878 GATTTTGGCTTTAACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTT 1957937
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| ||||| || || ||||| ||||||||
Sbjct 1957938 GCCCGTCAGGGTCTTCACAAAGATCTGCAT 1957967
>seq101
Length=4626942
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||||| || |||||||| || ||||||||||| | |||||| ||| ||
Sbjct 1982314 ACCAGGTGGAGAGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 1982373
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || ||||| | || || | |||||| || || || ||||||||||| |||
Sbjct 1982374 AGCTGCTTGCCAGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGG 1982433
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | ||||| ||| || || ||| || || | ||| | || |||
Sbjct 1982434 ATCTTGGCCTTCACATTTTCGATGGTATCACTGGGCTCTACTTCTAGGGTGATGGTCTTG 1982493
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|||||||| || || || || |||||||||
Sbjct 1982494 CCGGTCAGGGTCTTCACGAAGATCTGCATG 1982523
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||||||||| ||||||||||| | |||||| ||| || ||||| || ||
Sbjct 1982782 GTGGACTCTTTTTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCG 1982841
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| | || || | |||||| || || || ||||||||||| || || || ||
Sbjct 1982842 GCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTC 1982901
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | ||||| |||||| || || || || | ||| | || ||||||||||| ||
Sbjct 1982902 ACATTTTCGATGGTGTCGCTGGGTTCCACTTCCAGGGTTATGGTCTTGCCGGTCAGGGTC 1982961
Query 118722 TTTACAAAAATCTGCATG 118739
|| || || |||||||||
Sbjct 1982962 TTCACGAAGATCTGCATG 1982979
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| |||||||| || ||||||||||| | |||||| ||| || ||||| || ||
Sbjct 1983010 GTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCG 1983069
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| | || || | |||||| || || || ||||||||||| ||| || || ||
Sbjct 1983070 GCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGGATCTTGGCCTTC 1983129
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | ||||| |||||| || || ||||| | ||| | || ||||| ||||| ||
Sbjct 1983130 ACATTTTCGATGGTGTCACTGGGTTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTC 1983189
Query 118722 TTTACAAAAATCTGCAT 118738
|| || || ||||||||
Sbjct 1983190 TTCACGAAGATCTGCAT 1983206
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| |||||||| || ||||||||||| | |||||| ||| || ||||| || ||
Sbjct 1982554 GTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCG 1982613
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| | || || | |||||| || || || ||||||||||| || || || ||
Sbjct 1982614 GCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTC 1982673
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | ||||| |||||| || || || || | ||| | || ||||||||||| ||
Sbjct 1982674 ACATTTTCGATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 1982733
Query 118722 TTTACAAAAATCTGCATG 118739
|| || || |||||||||
Sbjct 1982734 TTCACGAAGATCTGCATG 1982751
>seq694
Length=814564
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| || || | ||||||||| | || | || |||| |||||||||||||| ||
Sbjct 212152 ACCACCACGGAGTCTCAACACAAGATGAAGAGTGGACTACTTTTGAATGTTGTAGTCAGA 212211
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
|| ||| || ||| || || || || ||||| |||| || | ||||||||| |||||
Sbjct 212212 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATTAGTCTCTGCTGATCAGGAGG 212271
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| || ||||| || ||| || || || | ||| | || |||| | || ||
Sbjct 212272 AATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAAC 212331
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| | || | || || || || || ||||| || |||||||||||
Sbjct 212332 CTCAAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAAATCTGCAT 212379
>seq517
Length=1171097
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| || || | ||||||||| | || | || ||||| ||||||| |||||| |
Sbjct 1142641 ACCACCACGGAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAAAGTTGTAGTTAGA 1142582
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
|| ||| || ||| || || || || ||||| |||| || | ||||||||| |||||
Sbjct 1142581 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGG 1142522
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| || ||||| || ||| || || || | ||| | || |||| | || ||
Sbjct 1142521 AATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAAC 1142462
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| || | || || || || || ||||| || |||||||||||
Sbjct 1142461 CTCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAAATCTGCAT 1142414
>seq695
Length=815165
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/229 (69%), Gaps = 1/229 (0%)
Strand=Plus/Minus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| || || | ||||||||| | || | || ||||| |||||||||||||| ||
Sbjct 16911 ACCACCACGGAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 16852
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
|| ||| || ||| || || | || ||||| |||| || | ||||||||| |||||
Sbjct 16851 CAAAGTACGTCCATCTTCCAGTGGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGG 16792
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| || ||||| || ||| || || || | ||| | || |||| | || ||
Sbjct 16791 AATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAAC 16732
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTT-TACAAAAATCTGCAT 118738
||||| || | || || || || || ||||| || |||||||||||
Sbjct 16731 CTCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCAACGAAAATCTGCAT 16683
>seq1820
Length=90317
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||||| || |||||||| || | ||||||||| | |||||| ||| ||
Sbjct 66963 ACCAGGTGGAGAGTCGACTCTTTCTGGAGGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 66904
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || || |||| || | |||||| ||||| | |||| ||| || |||
Sbjct 66903 AGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGTCGGGGCGGATGCACTCTTTATCTTGG 66844
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || ||||| ||||| || || ||||| | ||| | || |||
Sbjct 66843 ATCTTGGCCTTCACAGTTTCGATTGTGTCACTGGGTTCCACCTCCAGGGTGATGGTCTTG 66784
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| ||||| || || || |||||||||||
Sbjct 66783 CCAGTCAGTGTCTTCACGAAAATCTGCAT 66755
>seq26
Length=7528108
Score = 86.0 bits (94), Expect = 5e-12
Identities = 159/231 (69%), Gaps = 3/231 (1%)
Strand=Plus/Minus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| || || | ||||||||| | || | || ||||| |||||||||||||| ||
Sbjct 6810816 ACCACCACGAAGTCTCAACACAAGCTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 6810757
Query 118571 CATAGT-GCGCGT--ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGG 118627
|| ||| | | | ||| || || || || ||||| |||| || | ||||||||||||
Sbjct 6810756 CAAAGTAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGG 6810697
Query 118628 AGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTC 118687
||| || || ||||| || ||| || || || | ||| | || |||| | ||
Sbjct 6810696 AGGAATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTC 6810637
Query 118688 GACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| || || | || || || || || ||||| | || ||||||||
Sbjct 6810636 AACCTTGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCATGAATATCTGCAT 6810586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433769125387588
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