Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq292 131 2e-25
seq1641 104 3e-17
seq762 102 9e-17
seq150 102 9e-17
seq56 100 3e-16
seq451 98.7 1e-15
seq26 98.7 1e-15
seq1316 91.5 2e-13
seq376 91.5 2e-13
seq1820 87.8 2e-12
seq534 87.8 2e-12
>seq292
Length=3256830
Score = 131 bits (144), Expect = 2e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033
|||||| |||| ||| ||| || || ||||||||||||| |||||| || | || ||
Sbjct 1957758 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAATCAGACAGAGTGCGGCCATCTTC 1957817
Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093
||||| || || || || || || ||||||||||||| || | || |||||| ||
Sbjct 1957818 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCTTG 1957877
Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153
|||||| ||| | || | | ||||| || | || || |||| |||||||| ||
Sbjct 1957878 GATTTTGGCTTTAACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTT 1957937
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||||| || ||||| |||||||| |||||
Sbjct 1957938 GCCCGTCAGGGTCTTCACAAAGATCTGCAT 1957967
>seq1641
Length=265544
Score = 104 bits (114), Expect = 3e-17
Identities = 68/75 (91%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122
||||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct 148933 TTTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCA 148874
Query 60123 CTATACTACCGAGGA 60137
|||||||| ||||||
Sbjct 148873 CTATACTAACGAGGA 148859
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 200996 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 201055
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 201056 TACTAACGAGGA 201067
>seq762
Length=1166646
Score = 102 bits (112), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121
|| ||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct 1143360 TTGTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACC 1143419
Query 60122 ACTATACTACCGAGGA 60137
||||||||| ||||||
Sbjct 1143420 ACTATACTAACGAGGA 1143435
>seq150
Length=4781790
Score = 102 bits (112), Expect = 9e-17
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 1975149 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 1975090
Query 60124 TATACTACCGAGGA 60137
||||||| ||||||
Sbjct 1975089 TATACTAACGAGGA 1975076
>seq56
Length=5723395
Score = 100 bits (110), Expect = 3e-16
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 4249860 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 4249919
Query 60126 TACTACCGAGGATTG 60140
||||| |||||| ||
Sbjct 4249920 TACTAACGAGGACTG 4249934
Score = 100 bits (110), Expect = 3e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 4252203 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 4252262
Query 60126 TACTACCGAGGAT 60138
||||| |||||||
Sbjct 4252263 TACTAACGAGGAT 4252275
>seq451
Length=1369147
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 230960 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 231019
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 231020 TACTAACGAGGA 231031
>seq26
Length=7528108
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 4678968 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 4678909
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 4678908 TACTAACGAGGA 4678897
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 6755983 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 6755924
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 6755923 ATACTAACGAGGA 6755911
>seq1316
Length=240920
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| |||||||| |||||||||| | |||||||||||||
Sbjct 15841 CTCCCCGTCGGGGAATCGAACCCAGGTCTCCCACGTGACAGGCAGGGATACTCACCACTA 15900
Query 60126 TACTACCGAGGATTG 60140
||||| |||||| ||
Sbjct 15901 TACTAACGAGGACTG 15915
>seq376
Length=1707047
Score = 91.5 bits (100), Expect = 2e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033
|||||| |||| ||| ||| || |||||||||||||| |||||| | | | ||
Sbjct 762733 CACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAATCTAACAGAGTGTGGCCATGTTC 762674
Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093
|||||| || | || || | || ||||| ||||| | | || ||| |||||
Sbjct 762673 TAGCTGTTTGCTGGCAAAGGTCAGACGCTGTTGGTCAGGAAAGATGCCCTCGTTGTCTCG 762614
Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153
|||||| ||||| || | | |||||||| | | | |||| |||||||| ||
Sbjct 762613 GATTTTAGCTTTGACGTTCTCAATGGTGTCGCTGGGCTTGGCCTCGAGGGTGATGGTCTT 762554
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||| | || ||||| |||||||| |||||
Sbjct 762553 GCCCATCAGGGTCTTCACAAAGATCTGCAT 762524
>seq1820
Length=90317
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||| || || | |||||||||| ||||| || | || || |||||||| || || ||
Sbjct 66946 CTCTTTCTGGAGGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAA 66887
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || | ||||||||||| | | || ||| || || ||| || || | ||
Sbjct 66886 GATAAGCCTCTGCTGGTCGGGGCGGATGCACTCTTTATCTTGGATCTTGGCCTTCACAGT 66827
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | ||||| || | |||||| || | |||||||| ||||| || || ||||| ||
Sbjct 66826 TTCGATTGTGTCACTGGGTTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGTGTCTTCAC 66767
Query 43172 AAAGATTTGCATTTTTAC 43189
|| || |||||||| ||
Sbjct 66766 GAAAATCTGCATTTTGAC 66749
>seq534
Length=1522626
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| |||||||||| ||||||| || | |||||||||||
Sbjct 1339963 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCATGACAGGTGGGGAGACTCACCACTA 1339904
Query 60126 TACTACCGAGGAT 60138
||||| |||||||
Sbjct 1339903 TACTAACGAGGAT 1339891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571734765072920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |