Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq81 87.8 3e-12 >seq81 Length=4962868 Score = 87.8 bits (96), Expect = 3e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 10443 TATGCAAGATTAGCTCCCAGATCTGATTTAGCTCTAAATAAATTTATTGATATTGGAGCT 10502 |||| |||| |||||||| | |||| || ||| ||| | || || ||| | |||||| Sbjct 2076302 TATGGAAGAGTAGCTCCCCGTTCTGGCTTGGCTGCAAAACACTTCATCGATGTAGGAGCT 2076361 Query 10503 GGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGTAATATTATTTAAT 10553 || || || || ||||||||||||||||||||||| || || | |||||| Sbjct 2076362 GGCGTCATAGATGAAGATTATAGAGGAAATGTGGGTGTCGTACTGTTTAAT 2076412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743418690906880