Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq292 100 2e-16 >seq292 Length=3256830 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||| || ||| | || ||||| || || ||| |||| ||||| | || Sbjct 1957967 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1957908 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | || | ||||| | ||||| | || || ||| | || |||||| Sbjct 1957907 GACACCATTGAGAACGTTAAAGCCAAAATCCAAGATAAGGAGGGCATCCCCCCCGACCAG 1957848 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || ||| | || | |||||||||||| ||||||||| | ||| || ||||||| Sbjct 1957847 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGATGGCCGCACTCTGTCTGATTACAAT 1957788 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTG 25041 || ||||||||| |||| || || || ||| Sbjct 1957787 ATCCAGAAAGAGTCCACCCTGCACTTGGTG 1957758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418244918350880