Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq86 120 3e-22
seq292 98.7 9e-16
seq1820 96.9 3e-15
seq694 95.1 1e-14
seq54 93.3 4e-14
seq517 91.5 1e-13
seq695 89.7 5e-13
seq26 86.0 6e-12
seq56 84.2 2e-11
>seq86
Length=5199016
Score = 120 bits (132), Expect = 3e-22
Identities = 116/149 (78%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107
||||| |||||| || |||||||| ||||| || || || ||||| || || |||||
Sbjct 130198 ACCTCATCTTTGCTGGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTT 130257
Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167
|||| || ||||||||| || ||||| || ||||| ||||||||||||||||| ||
Sbjct 130258 CCCAGGTTCTGCTGGTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTA 130317
Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGC 23196
|| ||||| ||| ||||| ||||| ||
Sbjct 130318 CCTGTCTCTGTCTGAGACTCAATGATGGC 130346
>seq292
Length=3256830
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| ||||| ||||| || |||||| |||| || || ||
Sbjct 1957967 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1957908
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || ||| | ||| || ||||| ||| | || |||||||||
Sbjct 1957907 GACACCATTGAGAACGTTAAAGCCAAAATCCAAGATAAGGAGGGCATCCCCCCCGACCAG 1957848
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || || ||||||||| ||||||| ||| || ||||| ||
Sbjct 1957847 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGATGGCCGCACTCTGTCTGATTACAAT 1957788
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|| || ||||| || || || || |||| ||| | || |||| ||
Sbjct 1957787 ATCCAGAAAGAGTCCACCCTGCACTTGGTGCTTCGCCTCCGGGGTGG 1957741
>seq1820
Length=90317
Score = 96.9 bits (106), Expect = 3e-15
Identities = 153/218 (70%), Gaps = 1/218 (0%)
Strand=Plus/Plus
Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246
||||| ||||| |||||||| ||||| ||||| ||||| || |||||| | || || |||
Sbjct 66750 TCAAA-ATGCAGATTTTCGTGAAGACACTGACTGGCAAGACCATCACCCTGGAGGTGGAA 66808
Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCC 31306
|| |||| ||||||| || || | || || || || || | | |||
Sbjct 66809 CCCAGTGACACAATCGAAACTGTGAAGGCCAAGATCCAAGATAAAGAGTGCATCCGCCCC 66868
Query 31307 GACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGAT 31366
||||||||| | || || || || ||||| ||| ||||||| ||| | |||
Sbjct 66869 GACCAGCAGAGGCTTATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGAT 66928
Query 31367 TATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| ||| | || ||||| |||||||| || ||||||||
Sbjct 66929 TACAACCTCCAGAAAGAGTCGACTCTCCACCTGGTACT 66966
>seq694
Length=814564
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| || || || || || || || ||||| | || |||||||| ||
Sbjct 212379 ATGCAGATTTTCGTGAAAACCCTAACGGGGAAGACCATCACTCTTGAGGTTGAACCCTCG 212320
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | |||| || || | || ||| |||||||| | || || || |||
Sbjct 212319 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 212260
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371
||| | ||||| || |||||||| || ||||||| | | | ||| || || || ||
Sbjct 212259 CAGAGACTAATCTTTGCTGGCAAGCAACTGGAAGA-TGGACGTACTTTGTCTGACTACAA 212201
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
||||||||| | || ||||||||||| || | |||||
Sbjct 212200 CATTCAAAAGTAGTCCACTCTTCATCTTGTGTTGAGACT 212162
>seq54
Length=5886867
Score = 93.3 bits (102), Expect = 4e-14
Identities = 81/101 (80%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040
|| ||||| ||||| ||||| || |||||||| || |||||| ||||||| ||| |
Sbjct 1575063 GCCTTCGCTGCCGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCGTCAATATTCTGGCTC 1575004
Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGA 58081
|||||||| ||||||||||| ||||| |||||| ||| ||
Sbjct 1575003 AAGAAACGTGGCCTGATGCCTGGCCTCACGTTTTCCAATGA 1574963
>seq517
Length=1171097
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| || || || || || || || ||||| |||| |||||||| ||
Sbjct 1142414 ATGCAGATTTTCGTGAAAACCCTAACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCG 1142473
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | |||| || || | || ||| |||||||| | || || || |||
Sbjct 1142474 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 1142533
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371
||| | || || || |||||||| || ||||||| | | | ||| || | || ||
Sbjct 1142534 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGACGTACTTTGTCTAACTACAA 1142592
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
| ||||||| || || ||||||||||| || | |||||
Sbjct 1142593 CTTTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 1142631
>seq695
Length=815165
Score = 89.7 bits (98), Expect = 5e-13
Identities = 154/220 (70%), Gaps = 3/220 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTA-AAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
||||| |||||||| || || || || || || || ||||| |||| |||||||| ||
Sbjct 16683 ATGCAGATTTTCGTTGAAAACCCTAACGGGGAAGACCATCACTCTCGAGGTTGAACCCTC 16742
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|| | | |||| || || | || ||| |||||||| | || || || ||
Sbjct 16743 GGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCA 16802
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370
|||| | || || || |||||||| | ||||||| | | | ||| || || || |
Sbjct 16803 GCAGAGACTGATCTTTGCTGGCAAGCCACTGGAAGA-TGGACGTACTTTGTCTGACTACA 16861
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
|||||||||| || || ||||||||||| || | |||||
Sbjct 16862 ACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 16901
>seq26
Length=7528108
Score = 86.0 bits (94), Expect = 6e-12
Identities = 152/221 (69%), Gaps = 3/221 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||| | || || || || || || || ||||| || | |||||||| ||
Sbjct 6810586 ATGCAGATATTCATGAAAACCCTAACGGGGAAGACCATCACTCTCAAGGTTGAACCCTCG 6810645
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | |||| || || | || ||| |||||||| | || ||||| |||
Sbjct 6810646 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCCGATCAG 6810705
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC---TCTATGACTATGAGCGATTAT 31369
||| | || || || |||||||| || ||||||| | || ||| || || ||
Sbjct 6810706 CAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTACTTTGTCTGACTAC 6810765
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
||||||||||| || || |||||||| || || | |||||
Sbjct 6810766 AACATTCAAAAGGAGTCCACTCTTCAGCTTGTGTTGAGACT 6810806
>seq56
Length=5723395
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| |||| ||||| || |||||| | || || || ||
Sbjct 4239155 CATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 4239096
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| |||| | |||||| || || || || || ||| | || || |||||
Sbjct 4239095 TGACACCATCGAGAACGTCAAAGGGAAGATCCAAGAAAAAGAGGGCATCCCCCCTGACCA 4239036
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||| | || || || || || |||||| ||||||| || || || || ||
Sbjct 4239035 GCAGAGGCTGATCTTTGCAGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 4238976
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||| || || || || ||||| || || || || | |||||||||||
Sbjct 4238975 CATCCAGAAGGAGTCCACTCTGCACCTCGTCCTGCGCTTGAGGGGCGGT 4238927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445701825164880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |