Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq54 84.2 2e-11 >seq54 Length=5886867 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 ||||||| || || || ||||| || | |||||||| || |||||| | |||||||||| Sbjct 1575065 TGGCCTTCGCTGCCGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCGTCAATATTCTGGC 1575006 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 | ||||||||| || ||||| || | |||||||||| || | || ||| | || | Sbjct 1575005 TCAAGAAACGTGGCCTGATGCCTGGCCTCACGTTTTCCAATGAACTTATCAGCAGAGATG 1574946 Query 22868 A 22868 | Sbjct 1574945 A 1574945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356183285232367