Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq26 89.7 5e-13 >seq26 Length=7528108 Score = 89.7 bits (98), Expect = 5e-13 Identities = 146/207 (71%), Gaps = 5/207 (2%) Strand=Plus/Minus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCA---TTGTGC-TCGAGTCTTCGAG 143037 |||| || || || ||||| |||||||| || || | || | || | ||||| || Sbjct 6810791 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAGTACATCCA-TCTTCCAG 6810733 Query 143038 TTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAAT 143097 ||| || |||||| ||||||| | |||||||||||||| || ||||| || || ||| Sbjct 6810732 TTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATTCCTTCCTTATCCTGAAT 6810673 Query 143098 TTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCC 143157 || |||| | ||| | || |||| |||||| || | | ||| | ||||| || Sbjct 6810672 CTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTTGAGAGTGATGGTCTTCCC 6810613 Query 143158 GGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||||| | |||||| ||||| Sbjct 6810612 CGTTAGGGTTTTCATGAATATCTGCAT 6810586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506940952626480