Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq101 89.7 4e-13 >seq101 Length=4626942 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 |||| ||| || || || |||||||| ||||||||||| | ||| ||||||| Sbjct 1982770 ACCAGATGCAGGGTGGACTCTTTTTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 1982829 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | || ||||| ||| ||||||||||||| || || ||| | ||| || || || Sbjct 1982830 AGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGG 1982889 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 || || ||||| | | | | |||| |||||| ||||| ||| ||||| ||| Sbjct 1982890 ATCTTGGCCTTCACATTTTCGATGGTGTCGCTGGGTTCCACTTCCAGGGTTATGGTCTTG 1982949 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||||| || || || || || ||||| Sbjct 1982950 CCGGTCAGGGTCTTCACGAAGATCTGCAT 1982978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419527937110509