Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq64 96.9 3e-15
>seq64
Length=5459255
Score = 96.9 bits (106), Expect = 3e-15
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 13173 CTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTT 13232
|||||||||| || || || || || ||||| || || || ||||| || |||| ||| |
Sbjct 1613573 CTTCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCAGGCATGAGACCTCTTTTCT 1613514
Query 13233 TAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACG 13292
| | ||| |||||||||||||| || || || || || || ||||| || || ||||| |
Sbjct 1613513 TTAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATCCCTTCTACAGCAGCAAAAG 1613454
Query 13293 CTATCAACCTTTCACC 13308
| | || ||||| ||
Sbjct 1613453 CCACCACTCTTTCCCC 1613438
Score = 86.0 bits (94), Expect = 5e-12
Identities = 67/80 (84%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 12862 TTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTC 12921
|||||| || ||||| ||| ||||| || |||||||| |||||||| ||||| |||||
Sbjct 1627844 TTGATACTCTGCAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTTTC 1627785
Query 12922 CATAAAATCGAAAGGATTTT 12941
||||||||| || |||||||
Sbjct 1627784 CATAAAATCAAAGGGATTTT 1627765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430921527641778
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |