Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq43 125 6e-24
>seq43
Length=9688235
Score = 125 bits (138), Expect = 6e-24
Identities = 119/152 (78%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933
|| ||||| || ||||| || | || |||||||| |||||||||||||| |||||||||
Sbjct 9130263 GGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACTTGGAGGAGGTGATG 9130204
Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993
|| ||||| || || |||| || || |||| || ||||| ||||||||||| ||||||
Sbjct 9130203 CCCCAGGCTGAGAACCACGACCCAGAAGTCAAGGAACACGTGAACTCGCTGGGGGAAAAG 9130144
Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTG 129025
|| || || || | || | ||||| |||||
Sbjct 9130143 CTGAAGACCCTCAGGCTGAGGCTGCGGCGCTG 9130112
Score = 82.4 bits (90), Expect = 7e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 129092 GCTGCAGGAACGAGGCGTTTACAAGGCCATGAGCGAGTTCGACATATTCATCAACTACAT 129151
||| || || |||| || ||||| |||||||| ||||| ||||| ||||||||||||||
Sbjct 9127987 GCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACAT 9127928
Query 129152 AGAATCATACATGAC 129166
|||| | ||||||||
Sbjct 9127927 AGAAACGTACATGAC 9127913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447685537757680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |