Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq43 109 5e-19
seq81 82.4 7e-11
>seq43
Length=9688235
Score = 109 bits (120), Expect = 5e-19
Identities = 110/143 (77%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230
|| |||||||| |||| |||||||| ||||| ||| | || ||||| ||||| |||||
Sbjct 9130254 GGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACTTGGAGGAGGTGATGCCCCAGGCT 9130195
Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290
|| || |||| || || | || |||||||| || || ||||| ||||||||||||||
Sbjct 9130194 GAGAACCACGACCCAGAAGTCAAGGAACACGTGAACTCGCTGGGGGAAAAGCTGAAGACC 9130135
Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313
| || || | ||||| |||||
Sbjct 9130134 CTCAGGCTGAGGCTGCGGCGCTG 9130112
Score = 89.7 bits (98), Expect = 4e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 127379 AGCTTCAGGAAAGAGGCGTGTACAAGGCCATGAGTGAGTTTGACATATTCATCAACTACA 127438
|||| || || ||||| || ||||| |||||||||||||||||||| |||||||||||||
Sbjct 9127988 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 9127929
Query 127439 TCGAGACTTACATG 127452
| || || ||||||
Sbjct 9127928 TAGAAACGTACATG 9127915
>seq81
Length=4962868
Score = 82.4 bits (90), Expect = 7e-11
Identities = 108/150 (72%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 5638 GCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGC 5697
||| || || ||||| || || ||||| || || | || || | ||||| ||||| ||
Sbjct 2076418 GCCAAAATTAAACAGTACGACACCCACATTTCCTCTATAATCTTCATCTATGACGCCAGC 2076359
Query 5698 GCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAGCA 5757
|| || ||||||||||| || | |||| ||| || |||||||| || | || ||| |
Sbjct 2076358 TCCTACATCGATGAAGTGTTTTGCAGCCAAGCCAGAACGGGGAGCTACTCTTCCATAGAA 2076299
Query 5758 CCCATCGGGAAGCTGTATCTGCAGGTCCGT 5787
|||| ||||| || ||| | ||||||
Sbjct 2076298 CCCAGAAGGAAGAGCTACCTGAATGTCCGT 2076269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429993658713368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |