Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq540 87.8 2e-12 >seq540 Length=1121835 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 6/205 (3%) Strand=Plus/Plus Query 164500 TTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACA 164559 ||||| || |||||| | ||||| || | ||| |||| || || ||||| ||||| || Sbjct 865870 TTAGGTTGCAAACATGTTAAAGGCATCCTGTTATATGGGCCCCCAGGTTGTGGTAAGACT 865929 Query 164560 TTAATGGCTCGATGCATTGCTCAAGCTTTTAAATC---GCGACCCGTTAAAATTGTTAAT 164616 | |||||||| |||| |||| | || ||| | || || ||| | || ||| Sbjct 865930 CTCTTGGCTCGACAGATTGG-CAAGATGTTGAATGCAAGGGAGCCC--AAAGTGGTCAAT 865986 Query 164617 GGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTT 164676 || || ||| | | ||||||||||| || || ||||||||||| | | || | ||| Sbjct 865987 GGGCCAGAAATCCTTAACAAATATGTGGGAGAATCAGAAGCTAACATACGTAAACTCTTT 866046 Query 164677 CAGGAGGCTGAAGAAGAACAAAAGA 164701 || |||||||| ||||||| || Sbjct 866047 GCTGATGCTGAAGAGGAACAAAGGA 866071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595785680492400