Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_006146.1
Length=171096
Score E
Sequences producing significant alignments: (Bits) Value
seq43 134 2e-26
>seq43
Length=9688235
Score = 134 bits (148), Expect = 2e-26
Identities = 113/139 (81%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 10140 AGGGCTACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAA 10199
|||| |||||||| || || ||| |||| || ||||||||||||||| ||||||| || |
Sbjct 9130265 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACTTGGAGGAGGTGA 9130206
Query 10200 TGCCACAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGA 10259
|||| |||||||| || || ||||| | | ||| || ||||||||||| ||||| || |
Sbjct 9130205 TGCCCCAGGCTGAGAACCACGACCCAGAAGTCAAGGAACACGTGAACTCGCTGGGGGAAA 9130146
Query 10260 ATCTAAAGACCCTAAGGCT 10278
| || |||||||| |||||
Sbjct 9130145 AGCTGAAGACCCTCAGGCT 9130127
Score = 87.8 bits (96), Expect = 2e-12
Identities = 68/81 (84%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 10359 AGCTGCAGGAAAAAGGAGTCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTATA 10418
|||| || || | ||| |||||||||||||||||||| |||||||| || || ||||| |
Sbjct 9127988 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 9127929
Query 10419 TAGAAGCATACATGACCATGA 10439
||||| | |||||||| ||||
Sbjct 9127928 TAGAAACGTACATGACAATGA 9127908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547299905280640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |