Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq1848 84.2 3e-11 >seq1848 Length=83282 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/103 (79%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 118820 TCGCAGGTTCGAATCCTGCTCCTCCCACCT--TGGCCCATTAGTGTAGAGGCTTATCACG 118877 ||| ||||||||||||| | || | ||| ||| | ||||||||||| | || || Sbjct 30493 TCGTAGGTTCGAATCCTACCCCCGCTACCAAATGGGCTTTTAGTGTAGAGACCTAACATA 30552 Query 118878 CCACCCTGTCACGGTGGAGATCACGGGTTCGAATCCCGTATGG 118920 |||| ||||||| ||||||||| |||||| |||||||||| || Sbjct 30553 CCACACTGTCACTGTGGAGATCGCGGGTTTGAATCCCGTAAGG 30595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627877030985600