Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq86 96.9 9e-15
seq54 86.0 2e-11
>seq86
Length=5199016
Score = 96.9 bits (106), Expect = 9e-15
Identities = 113/153 (74%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| ||| |||| |||| ||||||||| || || |||| |||||||| || || || |||
Sbjct 130364 GCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACAGAGACAGGTACCCCGTACATG 130305
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
| ||||||||||| || || || ||| |||||||||| |||| || || || |
Sbjct 130304 CTCTACAAAGATTCCTGTAATCGGAAGAGCAACCAGCAGAACCTGGGAACGATCAAATGC 130245
Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263
|||||||| || || || || | || || |||
Sbjct 130244 AGCAACCTGTGCACAGAAATAGTAGAGTATACC 130212
Score = 95.1 bits (104), Expect = 3e-14
Identities = 109/147 (74%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897
||||| |||||||| || || |||||| ||| || ||||||||||||||||| |
Sbjct 131692 GGGGCATTTGCTATTTACCTGGAGCCTTGGCATTTAGACATTTTTGAGTTTCTTGATTTA 131633
Query 363898 CGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTT 363957
||| ||||| ||||| || ||| |||||| | || || |||| ||| |||||| ||
Sbjct 131632 AAGAAGAACACAGGAAAGGAAGAACAGCGTGCCAGGGACCTTTTCTTTGCCCTTTGGATT 131573
Query 363958 TCTGACCATTTTATGAAGCGCGTGGAG 363984
| || | || ||||| || ||||||
Sbjct 131572 CCAGATCTCTTCATGAAACGAGTGGAG 131546
Score = 91.5 bits (100), Expect = 4e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 364951 CAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATT 365010
|||| ||| |||| | |||| || || ||||||| |||| || || || |||||||||
Sbjct 120255 CAGAGCATACCAGAAATTCCTGATGACCTGAAGCAACTTTATAAGACTGTGTGGGAAATT 120196
Query 365011 TCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAG 365070
|| | |||| | || | ||||| || || | |||||||| || ||| ||||||
Sbjct 120195 TCACAGAAAACTGTTCTTAAGATGGCAGCTGAAAGAGGTGCTTTCATTGATCAAAGCCAG 120136
Query 365071 TCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTAC 365130
|| || ||| | ||| || |||| | || || ||| || || ||||| ||||||
Sbjct 120135 TCTTTGAACATCCACATCGCTGAGCCTAACTACGGCAAACTCACTAGTATGCACTTCTAC 120076
Query 365131 GGGTGGAA 365138
|| |||||
Sbjct 120075 GGCTGGAA 120068
>seq54
Length=5886867
Score = 86.0 bits (94), Expect = 2e-11
Identities = 101/134 (75%), Gaps = 2/134 (1%)
Strand=Plus/Minus
Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTG-C 22547
||||| || | || || |||| || ||||| || ||||||||||| | ||||| | |
Sbjct 1575075 GAACGGGTTGTGGCCTTCGCTGCCGTGGAAGGAATCTTCTTTTCTGGTTC-TTTTGCGTC 1575017
Query 22548 AATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAAT 22607
||| || ||||| || ||||||| | ||||| || || |||||||| ||||| | ||
Sbjct 1575016 AATATTCTGGCTCAAGAAACGTGGCCTGATGCCTGGCCTCACGTTTTCCAATGAACTTAT 1574957
Query 22608 TAGCCGAGATGAGG 22621
||| |||||||||
Sbjct 1574956 CAGCAGAGATGAGG 1574943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303160072762598
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |