Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq292 100 3e-16
seq101 93.3 4e-14
seq694 89.7 5e-13
seq517 86.0 6e-12
seq695 84.2 2e-11
>seq292
Length=3256830
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | || ||||| || || | ||| ||||| || || || ||||||||
Sbjct 1957740 GCCACCCCGGAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAATCAGA 1957799
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| ||||| || || ||||| ||||| || | || | |||||||||||| || ||
Sbjct 1957800 CAGAGTGCGGCCATCTTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCGGGGGG 1957859
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGA 131185
||| || || || || |||||| |||| | | | ||| | || || ||| |||||
Sbjct 1957860 GATGCCCTCCTTATCTTGGATTTT-GGCTTTAACGTTCTCAATGGTGTCACTGGGCTCGA 1957918
Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | ||| || || || || || || || || ||||||||
Sbjct 1957919 CCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1957967
>seq101
Length=4626942
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| | || ||||| || | ||| | ||| ||||| ||||| |||||||||||
Sbjct 1982751 GCCACCTCTCAGGCGCAGGACCAGATGCAGGGTGGACTCTTTTTGGATGTTGTAATCAGA 1982810
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||||| || || ||||||||||| || | || | | ||||||||| || ||
Sbjct 1982811 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGG 1982870
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || || || ||| || ||| | | || | || ||| ||| || |
Sbjct 1982871 GATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCGCTGGGTTCCAC 1982930
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | ||| | ||| || ||||| || || || ||||| |||||||||
Sbjct 1982931 TTCCAGGGTTATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATG 1982979
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065
||||||| | || ||| || || | || | |||||||| || || |||||||||||
Sbjct 1982294 AGCCACCCCTCAGACGAAGAACCAGGTGGAGAGTCGACTCTTTCTGGATGTTGTAATCAG 1982353
Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125
| ||||| || || ||||||||||| || | || | | ||||||||| || |
Sbjct 1982354 AAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAAATAAGCCTCTGCTGGTCAGGGG 1982413
Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185
|||| || || || || ||| || ||| | | || | ||||| ||| ||| |
Sbjct 1982414 GGATGCCCTCCTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTATCACTGGGCTCTA 1982473
Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | ||| | ||| || ||||| || || || ||||| |||||||||
Sbjct 1982474 CTTCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATG 1982523
>seq694
Length=814564
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | | || ||| | ||| | || |||| ||||||||||||||| || |
Sbjct 212153 CCACCACGGAGTCTCAACACAAGATGAAGAGTGGACTACTTTTGAATGTTGTAGTCAGAC 212212
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || || || || |||||||| || |||||| | |||||| || |||||
Sbjct 212213 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATTAGTCTCTGCTGATCAGGAGGA 212272
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|||||||| || || || || ||| | | || | ||||| | || || |
Sbjct 212273 ATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACC 212332
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || ||||| ||||| ||||||||||||||
Sbjct 212333 TCAAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAAATCTGCAT 212379
>seq517
Length=1171097
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | | || ||| | ||| | || ||||||||||||| |||||| | |
Sbjct 1142640 CCACCACGGAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAAAGTTGTAGTTAGAC 1142581
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || || || || |||||||| || |||| | | |||||| || |||||
Sbjct 1142580 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGA 1142521
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|||||||| || || || || ||| | | || | ||||| | || || |
Sbjct 1142520 ATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACC 1142461
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | ||| || || ||||| ||||| ||||||||||||||
Sbjct 1142460 TCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAAATCTGCAT 1142414
>seq695
Length=815165
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/228 (68%), Gaps = 1/228 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | | || ||| | ||| | || |||||||||||||||||||| || |
Sbjct 16910 CCACCACGGAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 16851
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || || || || ||||||| || |||| | | |||||| || |||||
Sbjct 16850 AAAGTACGTCCATCTTCCAGTGGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGA 16791
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|||||||| || || || || ||| | | || | ||||| | || || |
Sbjct 16790 ATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACC 16731
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTT-TACGAAAATCTGCAT 131234
|||| || | ||| || || ||||| ||||| ||||||||||||||
Sbjct 16730 TCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCAACGAAAATCTGCAT 16683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471944423045760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |