Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq54 98.7 1e-15
>seq54
Length=5886867
Score = 98.7 bits (108), Expect = 1e-15
Identities = 90/114 (79%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193
|||||| || || | || || | ||| || |||||||||||||| |||||||| |||
Sbjct 1574963 TCATTGGAAAACGTGAGGCCAGGCATCAGGCCACGTTTCTTGAGCCAGAATATTGACGCA 1575022
Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCG 93247
||| ||||||||| || || ||||||||||| || || ||||||| ||||||
Sbjct 1575023 AAAGAACCAGAAAAGAAGATTCCTTCCACGGCAGCGAAGGCCACAACCCGTTCG 1575076
Score = 86.0 bits (94), Expect = 7e-12
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412
|||||| ||||| || || || | ||| ||||| || ||||||| || |||||
Sbjct 1577389 GAATCTTTAATGTAAGTGTCAATGAGGAGACTGTACATCTCTGAATGGATGTTTTCCATG 1577448
Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTG 93462
||||||||||| || |||||||| | ||||| |||||||| ||||||||
Sbjct 1577449 GCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTGATCTGAACTTCTTG 1577498
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556780131752360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |