Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq101 118 9e-22
seq694 107 2e-18
seq695 100 2e-16
seq1820 82.4 6e-11
seq63 82.4 6e-11
>seq101
Length=4626942
Score = 118 bits (130), Expect = 9e-22
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | ||||| || || | || || ||||||||| ||| |
Sbjct 1982978 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATAACCCTGGAAGTGGAACCCAGC 1982919
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || | || || || || || |||||||| || || || || ||
Sbjct 1982918 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCAG 1982859
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | ||||| ||||||||||| ||| | || ||| |||||| | || |||||||||
Sbjct 1982858 CAGAGGCTTATTTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 1982799
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
|| |||||||| |||||| | ||| | || ||||
Sbjct 1982798 ATCCAAAAAGAGTCCACCCTGCATCTGGTCCTGCG 1982764
Score = 111 bits (122), Expect = 1e-19
Identities = 157/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272
|| || ||||| || || || || || | || || || || |||| || || ||||||
Sbjct 1983212 GTCAAAATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAA 1983153
Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332
||| || ||| | || || | || || || ||||| |||||||| || || ||
Sbjct 1983152 CCCAGTGACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAGGAGGGCATCCCCCCT 1983093
Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392
|| || || | ||||| ||||||||||| ||| | || ||| |||||| | || |||
Sbjct 1983092 GACCAGCAGAGGCTTATTTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGAT 1983033
Query 22393 TACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
|||||||| || ||||| |||||| | ||| | || ||||
Sbjct 1983032 TACAACATCCAGAAAGAGTCCACCCTGCATCTGGTCCTGCG 1982992
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | ||||| || || |||| || ||||||||| |||
Sbjct 1982750 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAACCCAGT 1982691
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || | || || || || || |||||||| || || || || ||
Sbjct 1982690 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCAG 1982631
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | ||||| ||||||||||| ||| | || ||| |||||| | || |||||||||
Sbjct 1982630 CAGAGGCTTATTTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 1982571
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
|| || ||||| ||||| | ||| | || ||||
Sbjct 1982570 ATCCAGAAAGAGTCCACTCTGCATCTGGTCCTGCG 1982536
Score = 98.7 bits (108), Expect = 8e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | ||||| || || |||| || ||||| || |||
Sbjct 1982522 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTAGAAGTAGAGCCCAGT 1982463
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || || | || || || ||||| |||||||| || || || || ||
Sbjct 1982462 GATACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAGGAGGGCATCCCCCCTGACCAG 1982403
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | ||||| ||||| ||||| ||| | || ||| |||||| | || |||||||||
Sbjct 1982402 CAGAGGCTTATTTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 1982343
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || ||||| || ||
Sbjct 1982342 ATCCAGAAAGAGTCGAC 1982326
>seq694
Length=814564
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| ||||| || ||||| |||| || || || |||||||||| || ||| || |
Sbjct 212380 GATGCAGATTTTCGTGAAAACCCTAACGGGGAAGACCATCACTCTTGAGGTTGAACCCTC 212321
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||||| | || || | || || ||||| || ||||| || ||||| || |||||
Sbjct 212320 GGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCA 212261
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | || || ||||| ||||| || | || ||| || || | || || |||||
Sbjct 212260 GCAGAGACTAATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 212201
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||| | ||||| | ||| | || ||| || | || || |||
Sbjct 212200 CATTCAAAAGTAGTCCACTCTTCATCTTGTGTTGAGACTCCGTGGTGGT 212152
>seq695
Length=815165
Score = 100 bits (110), Expect = 2e-16
Identities = 161/230 (70%), Gaps = 1/230 (0%)
Strand=Plus/Plus
Query 22218 GATGCAAATTTTTGTT-AAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
|||||| ||||| ||| ||||| |||| || || || ||||||| || || ||| ||
Sbjct 16682 GATGCAGATTTTCGTTGAAAACCCTAACGGGGAAGACCATCACTCTCGAGGTTGAACCCT 16741
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| ||||| | || || | || || ||||| || ||||| || ||||| || ||||
Sbjct 16742 CGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATC 16801
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || | || || ||||| ||||| | | || ||| || || | || || ||||
Sbjct 16802 AGCAGAGACTGATCTTTGCTGGCAAGCCACTGGAAGATGGACGTACTTTGTCTGACTACA 16861
Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||||| || ||||| | ||| | || ||| || | || || |||
Sbjct 16862 ACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTCCGTGGTGGT 16911
>seq1820
Length=90317
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272
|| || ||||| ||||| || || || | || || || || |||| || || ||||||
Sbjct 66749 GTCAAAATGCAGATTTTCGTGAAGACACTGACTGGCAAGACCATCACCCTGGAGGTGGAA 66808
Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332
||| || || | || | | || || || ||||| || ||| | || | |||
Sbjct 66809 CCCAGTGACACAATCGAAACTGTGAAGGCCAAGATCCAAGATAAAGAGTGCATCCGCCCC 66868
Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392
|| || || | ||||| ||||||||||| ||| | || ||| |||||| | || |||
Sbjct 66869 GACCAGCAGAGGCTTATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGAT 66928
Query 22393 TACAACATTCAAAAAGAATCCAC 22415
|||||| | || ||||| || ||
Sbjct 66929 TACAACCTCCAGAAAGAGTCGAC 66951
>seq63
Length=7304539
Score = 82.4 bits (90), Expect = 6e-11
Identities = 139/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
|| |||| |||||||| | || || | || || || |||| ||||| ||| | |||
Sbjct 4206377 AGTTGCAGATTTTTGTGGAGACCCTAGCTGGCAAGACCATCACCCTTGAGGTG-ACCCCA 4206435
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| | | || | |||||| ||||| |||||||||||||| || || || |
Sbjct 4206436 GTGGCATCACTGAGAAGATCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGCCT 4206495
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || |||| || ||||| ||||||| | |||||| || ||||| || || || ||||
Sbjct 4206496 AGCAGCGTCGGATTTTTGCGGGCAAACCGCCAGAGGA-CAGCGCACTGTGTCAGACTACA 4206554
Query 22397 ACATTCAAAAAGAATCCAC 22415
| | || ||||| |||||
Sbjct 4206555 ATAGCCAGAAAGAGTCCAC 4206573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419668717223785
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |