Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq101 176 8e-39
seq56 170 4e-37
seq292 152 9e-32
seq26 127 4e-24
seq9 114 2e-20
seq376 113 8e-20
seq887 98.7 2e-15
>seq101
Length=4626942
Score = 176 bits (194), Expect = 8e-39
Identities = 172/219 (79%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
||||||| |||| || || |||||||||||||||||||| ||||| || || || |
Sbjct 1982761 AGGCGCAGGACCAGATGCAGGGTGGACTCTTTTTGGATGTTGTAATCAGAAAGAGTGCGG 1982820
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| ||||| || || || || || ||||| || || ||||| |||
Sbjct 1982821 CCATCTTCCAGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCC 1982880
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422
|| || || ||||| ||||| || ||||||||||| ||| | ||| ||||||| |||
Sbjct 1982881 TTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTC-GCTGGGTTCCACTTCCAGGGT 1982939
Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || || || |||||||| ||||| ||||||||
Sbjct 1982940 TATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1982978
Score = 176 bits (194), Expect = 8e-39
Identities = 172/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
||||||| |||| || || ||||||||||| |||||||| ||||| || || || |
Sbjct 1982989 AGGCGCAGGACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGG 1983048
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| ||||| || || || || || ||||| || || ||||| |||
Sbjct 1983049 CCATCTTCCAGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCC 1983108
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
|| ||||| ||||| ||||| || ||||||||||| | ||| || |||| ||||
Sbjct 1983109 TTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGTTCCACCTCCAGGGTG 1983168
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
||||| || || || |||||||| ||||| ||||||||| ||
Sbjct 1983169 ATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATTTTG 1983210
Score = 172 bits (190), Expect = 1e-37
Identities = 169/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
||||||| |||| || || ||||||||||| |||||||| ||||| || || || |
Sbjct 1982533 AGGCGCAGGACCAGATGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGG 1982592
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| ||||| || || || || || ||||| || || ||||| |||
Sbjct 1982593 CCATCTTCCAGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCC 1982652
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
|| || || ||||| ||||| || ||||||||||| | ||| ||||||| ||||
Sbjct 1982653 TTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGTTCCACTTCCAGGGTG 1982712
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || || || |||||||| ||||| ||||||||
Sbjct 1982713 ATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1982750
>seq56
Length=5723395
Score = 170 bits (188), Expect = 4e-37
Identities = 169/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
||||| | |||| ||| ||||||||||| || |||||||| || || || || || | |
Sbjct 4239621 AGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGC 4239680
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | ||| ||||| || || || || || || ||||| || || ||||| ||
Sbjct 4239681 CCATCTTCCAGCTGTTTCCCCGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCT 4239740
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| ||||||||| |||||||||||| | || || |||| ||||
Sbjct 4239741 TTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 4239800
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
||||| || || || | |||||| ||||| |||||||||
Sbjct 4239801 ATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCATT 4239839
Score = 168 bits (186), Expect = 1e-36
Identities = 168/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
||||| | |||| ||| ||||||||||| || |||||||| || || || || || | |
Sbjct 4239393 AGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGC 4239452
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | ||| ||||| || || || || || || ||||| || || ||||| ||
Sbjct 4239453 CCATCTTCCAGCTGTTTCCCCGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCT 4239512
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| ||||||||| |||||||||||| | || || |||| ||||
Sbjct 4239513 TTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 4239572
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || || || | |||||| ||||| ||||||||
Sbjct 4239573 ATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4239610
Score = 159 bits (176), Expect = 6e-34
Identities = 166/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
||||| | |||| ||| || |||||||| || ||||| || || || || || || | |
Sbjct 4239165 AGGCGGAGCACCAGGTGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGACAGGGTGCGC 4239224
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | ||| ||||| || || || || || || ||||| || || ||||| ||
Sbjct 4239225 CCATCTTCCAGCTGTTTCCCCGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCT 4239284
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| ||||||||| |||||||||||| | || || |||| ||||
Sbjct 4239285 TTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 4239344
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || || || | |||||| ||||| ||||||||
Sbjct 4239345 ATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4239382
Score = 150 bits (166), Expect = 3e-31
Identities = 163/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 68246 GCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCC 68305
||||| || | ||| || |||||||| || |||||||| || || || || || | |||
Sbjct 4238939 GCGCAGGACGAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCC 4238998
Query 68306 ATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTT 68365
|||||| | ||| ||||| || || || || || || ||||| || || ||||| || ||
Sbjct 4238999 ATCTTCCAGCTGTTTCCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTT 4239058
Query 68366 GTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGAT 68425
||||| ||||| | |||||| |||||||||||| | || || |||| ||||||
Sbjct 4239059 TTCTTGGATCTTCCCTTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGAT 4239118
Query 68426 GGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || || || | |||||| ||||| ||||||||
Sbjct 4239119 GGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4239154
>seq292
Length=3256830
Score = 152 bits (168), Expect = 9e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | |||||||| || ||||||||||| ||||| || ||||| ||
Sbjct 1957741 CCACCCCGGAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAATCAGAC 1957800
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | ||| || || || || || || | || |||||||| ||
Sbjct 1957801 AGAGTGCGGCCATCTTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCGGGGGGG 1957860
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||| ||||| || || || || ||| ||| |||||||| | || ||
Sbjct 1957861 ATGCCCTCCTTATCTTGGATTTTGGCTTTAACGTTCTCAATGGTGTCACTGGGCTCGACC 1957920
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| || ||||| |||||||| || || ||||||||
Sbjct 1957921 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1957967
>seq26
Length=7528108
Score = 127 bits (140), Expect = 4e-24
Identities = 170/234 (73%), Gaps = 3/234 (1%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| | ||| || | || || |||||||| ||||| ||||| || || ||
Sbjct 6810815 CCACCACGAAGTCTCAACACAAGCTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 6810756
Query 68295 A--GT-GTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGT 68351
| || || | |||||||| | ||||| || || || || || || || || |||||
Sbjct 6810755 AAAGTAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGA 6810696
Query 68352 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCT 68411
||||| |||||||| || |||||||| ||||| || || || || || | | |||
Sbjct 6810695 GGAATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCA 6810636
Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| | | |||||||| || ||||| ||||| || | ||||||||||||| ||
Sbjct 6810635 ACCTTGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCATGAATATCTGCATTCTG 6810582
>seq9
Length=9398461
Score = 114 bits (126), Expect = 2e-20
Identities = 157/216 (73%), Gaps = 5/216 (2%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA--GAGTGTCCTCCCATCTT 68310
|||| ||| | || |||||||| |||| | | | ||| || |||||| || | |||
Sbjct 525098 ACCAGGTGGGGAGTCGACTCTTTCTGGAAGCTGTGATCAGAAAGAGTGTGGTCAC--CTT 525155
Query 68311 CTAACTGCTTCCC-GGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
| | |||||| || || | | ||||| || |||||||| | || |||| || || |||
Sbjct 525156 CCAGCTGCTTGCCTGGTGGAAATGAGCCTCTGTTGGTCAGCGGGGCTGCCCTCTTTATCT 525215
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|| ||||| ||||| || ||||||||||| | || || |||| |||||||||
Sbjct 525216 TGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 525275
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| || || |||||||| ||||| |||||||| ||
Sbjct 525276 TTGCCGGTCAGGGTCTTCACGAAGCTCTGCATTTTG 525311
>seq376
Length=1707047
Score = 113 bits (124), Expect = 8e-20
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
||||| | |||||||| || ||||||||||| || || || ||||| | || ||
Sbjct 762741 AGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAATCTAACAGAGTGTGG 762682
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||| ||||| ||| || | ||| || | || | |||||||| || ||||| ||
Sbjct 762681 CCATGTTCTAGCTGTTTGCTGGCAAAGGTCAGACGCTGTTGGTCAGGAAAGATGCCCTCG 762622
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422
|||||| | || || || |||||| ||| |||||||| ||| | | | || | |||
Sbjct 762621 TTGTCTCGGATTTTAGCTTTGACGTTCTCAATGGTGTC-GCTGGGCTTGGCCTCGAGGGT 762563
Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||| || ||| | |||||||| || || ||||||||
Sbjct 762562 GATGGTCTTGCCCATCAGGGTCTTCACAAAGATCTGCAT 762524
>seq887
Length=554748
Score = 98.7 bits (108), Expect = 2e-15
Identities = 151/209 (72%), Gaps = 6/209 (3%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| || || ||||||||||| |||||||| || || ||||||| | ||||| ||
Sbjct 107251 ACCACATGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGTG--CAGCCATCCTCC 107308
Query 68313 AACTGCTTCCCGGCGAATATGAG-TCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTG 68371
| ||| || || || | || || | | | ||| ||||| ||||| || ||||||||
Sbjct 107309 AGCTGTTTGCCTGCAAGAATCAGATGGAGGCTAGTCAGGTGGGATGCCCTCTTTGTCTTG 107368
Query 68372 AATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTT 68430
|| || || ||||| |||| |||||| |||| | || | || | | ||||||| |
Sbjct 107369 GATTTTGGCTTTGACATCCTCATTGGTGT-TGCTGGGCTCAGCCTCAAGGATGATGGTCT 107427
Query 68431 TTCCCGTGAGGGTCTTGACGAATATCTGC 68459
| ||| | |||||||| || || ||||||
Sbjct 107428 TGCCC-TCAGGGTCTTCACAAAGATCTGC 107455
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921488891475080
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