Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq694 84.2 2e-11 >seq694 Length=814564 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||| |||||||||||||||||| || |||||| || || ||||| || || | | Sbjct 212186 GACTACTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCA 212245 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539 ||||||| | ||| || || ||||| || ||||| || || ||| | || | |||| Sbjct 212246 AAGATTAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC-CTGAATCTTGGCCTTTAC 212304 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | ||| | || || | | || ||||| | || | || || || || || ||||| Sbjct 212305 ATTTTCTATTGTATCCGAGGGTTCAACCTCAAGAGTGATGGTCTTCCCCGTTAGGGTTTT 212364 Query 138600 TACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 212365 CACGAAAATCTGCAT 212379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496190510188080