Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq694 89.7 4e-13
seq517 89.7 4e-13
seq695 87.8 1e-12
>seq694
Length=814564
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| || | ||| || || | |||||| || || | ||||| |||||||| ||
Sbjct 212153 CCACCACGGAGTCTCAACACAAGATGAAGAGTGGACTACTTTTGAATGTTGTAGTCAGAC 212212
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | | | | ||||| | ||| |||||||| | || | | ||| || || |||
Sbjct 212213 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATTAGTCTCTGCTGATCAGGAGGA 212272
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
||||||||||| || ||| ||| |||||| ||||||| ||||| ||| ||
Sbjct 212273 ATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACC 212332
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| | || ||||| || || || || ||||| || ||||| |||||
Sbjct 212333 TCAAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAAATCTGCAT 212379
>seq517
Length=1171097
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| || | ||| || || | |||||| || || || ||||| | |||||| |
Sbjct 1142640 CCACCACGGAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAAAGTTGTAGTTAGAC 1142581
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | | | | ||||| | ||| |||||||| | |||| | ||| || || |||
Sbjct 1142580 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGA 1142521
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
||||||||||| || ||| ||| |||||| ||||||| ||||| ||| ||
Sbjct 1142520 ATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACC 1142461
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| | || ||||| || || || || ||||| || ||||| |||||
Sbjct 1142460 TCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAAATCTGCAT 1142414
>seq695
Length=815165
Score = 87.8 bits (96), Expect = 1e-12
Identities = 157/228 (69%), Gaps = 1/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| || | ||| || || | |||||| || || || ||||| |||||||| ||
Sbjct 16910 CCACCACGGAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 16851
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | | | | ||||| | | | |||||||| | |||| | ||| || || |||
Sbjct 16850 AAAGTACGTCCATCTTCCAGTGGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGA 16791
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
||||||||||| || ||| ||| |||||| ||||||| ||||| ||| ||
Sbjct 16790 ATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACC 16731
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTT-TACAAAAATTTGCAT 15176
|| | || ||||| || || || || ||||| || ||||| |||||
Sbjct 16730 TCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCAACGAAAATCTGCAT 16683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357341521618865
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |