Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq292 82.4 5e-11 >seq292 Length=3256830 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/233 (68%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 ||| || || | || || ||||| |||| ||| ||||| || ||||| ||||| | Sbjct 1957740 GCCACCCCGGAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAATCAGA 1957799 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 || | ||| |||| |||| ||||| || ||||||| | ||||||||| || | ||| Sbjct 1957800 CAGAGTGCGGCCATCTTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCGGGGGG 1957859 Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTC--TGCGCTTTCC 39669 | ||| || || || ||||| ||||| || | | ||||| || ||| | Sbjct 1957860 GATGCCCTCCTTATCTTGGATTTTGGCTTTAACGTTCTCAATGGTGTCACTGGGCT--CG 1957917 Query 39670 ACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATGTC 39722 || || | || || || || ||||| | || || || ||||||||||| || Sbjct 1957918 ACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATCTC 1957970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347320537192037