Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq292 149 6e-31
seq56 145 8e-30
seq101 127 2e-24
seq376 89.7 5e-13
seq1935 84.2 2e-11
seq887 82.4 8e-11
>seq292
Length=3256830
Score = 149 bits (164), Expect = 6e-31
Identities = 164/216 (76%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || |||||||| ||||||||| |||| |||||| |||
Sbjct 1957967 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1957908
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| |||||| ||||||| || || ||||| || ||| |||||||
Sbjct 1957907 GACACCATTGAGAACG-TTAAAGCCAAAATCCAAGATAAGGAGGGCATCCCCCCCGACCA 1957849
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || |||| ||||||||||||||||| || | ||||| || || |||||
Sbjct 1957848 GCAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGATGGCCGCACTCTGTCTGATTACAA 1957789
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| || || | || ||||| |||||||| ||
Sbjct 1957788 TATCCAGAAAGAGTCCACCCTGCACTTGGTGCTTCG 1957753
>seq56
Length=5723395
Score = 145 bits (160), Expect = 8e-30
Identities = 171/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || ||||| ||||||||| | || || ||| |||
Sbjct 4239610 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 4239551
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||||||||| || ||| | |||||
Sbjct 4239550 GACACCATCGAGAACG-TCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCA 4239492
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | ||||| ||||||||||| || | ||||||||| ||||||||
Sbjct 4239491 GCAGAGGCTGATCTTTGCGGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 4239432
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| ||||| | |||||||| ||||||| || | ||||| |||
Sbjct 4239431 CATCCAGAAGGAGTCCACGCTGCACCTGGTGCTCCGCCTCAGAGGGGGC 4239383
Score = 141 bits (156), Expect = 9e-29
Identities = 171/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
|||||| || ||||| || || | || || || ||||||||| | || || ||| |||
Sbjct 4239839 AATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 4239780
Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | | |||| | || | || |||| ||||||||||| || ||| | ||||
Sbjct 4239779 TGACACCATCGAGAACG-TCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACC 4239721
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||| |||| || | ||||| ||||||||||| || | ||||||||| |||||||
Sbjct 4239720 AGCAGAGGCTGATCTTTGCGGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACA 4239661
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||||| ||||| | |||||||| ||||||| || | ||||| |||
Sbjct 4239660 ACATCCAGAAGGAGTCCACGCTGCACCTGGTGCTCCGCCTCAGAGGGGGC 4239611
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || ||||| ||||||||| | || || ||| |||
Sbjct 4239154 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 4239095
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | |||| || |||| || |||||||| || ||| | |||||
Sbjct 4239094 GACACCATCGAGAACG-TCAAAGGGAAGATCCAAGAAAAAGAGGGCATCCCCCCTGACCA 4239036
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | || || ||||||||||| || | ||||||||| ||||||||
Sbjct 4239035 GCAGAGGCTGATCTTTGCAGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 4238976
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| | || ||||| | || ||||| ||||| |||||
Sbjct 4238975 CATCCAGAAGGAGTCCACTCTGCACCTCGTCCTGCGCTTGAGGGGCGG 4238928
Score = 136 bits (150), Expect = 4e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || ||||| ||||||||| | || || ||| |||
Sbjct 4239382 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 4239323
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||||||||| || ||| | |||||
Sbjct 4239322 GACACCATCGAGAACG-TCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCA 4239264
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | ||||| ||||||||||| || | ||||||||| ||||||||
Sbjct 4239263 GCAGAGGCTGATCTTTGCGGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 4239204
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| ||||| | || ||||| ||||||| || | ||||| |||
Sbjct 4239203 TATCCAGAAGGAGTCCACTCTGCACCTGGTGCTCCGCCTCAGAGGGGGC 4239155
>seq101
Length=4626942
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| ||||| ||| | || || || ||| |
Sbjct 1982978 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATAACCCTGGAAGTGGAACCCAGC 1982919
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | ||| | || | || |||| || || ||||| || ||| | |||||
Sbjct 1982918 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCAG 1982859
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| |||| |||| || ||||| |||||||| || | ||||| || || ||||||
Sbjct 1982858 CAGAGGCTTATTTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 1982799
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||||| || | || |||||| |||| ||||| ||||||| |||
Sbjct 1982798 ATCCAAAAAGAGTCCACCCTGCATCTGGTCCTGCGCCTGAGAGGTGGC 1982751
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|||||||| || ||||| || || || || ||||| ||||||||| | || || || ||
Sbjct 1983209 AAAATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAACCC 1983150
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| |||| | | ||| | || | || |||| || || ||||| || ||| | |||
Sbjct 1983149 AGTGACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAGGAGGGCATCCCCCCTGAC 1983090
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||| |||| |||| || ||||| |||||||| || | ||||| || || |||
Sbjct 1983089 CAGCAGAGGCTTATTTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTAC 1983030
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||||| || || | || |||||| |||| ||||| |||| || |||
Sbjct 1983029 AACATCCAGAAAGAGTCCACCCTGCATCTGGTCCTGCGCCTGAGGGGTGGC 1982979
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| ||||||||| | || || || |||
Sbjct 1982750 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAACCCAGT 1982691
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | ||| | || | || |||| || || ||||| || ||| | |||||
Sbjct 1982690 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCAG 1982631
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| |||| |||| || ||||| |||||||| || | ||||| || || ||||||
Sbjct 1982630 CAGAGGCTTATTTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 1982571
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| || || | || |||||| |||| ||||| |||| || |||
Sbjct 1982570 ATCCAGAAAGAGTCCACTCTGCATCTGGTCCTGCGCCTGAGGGGTGGC 1982523
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| ||||||||| | || || ||| |||
Sbjct 1982522 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTAGAAGTAGAGCCCAGT 1982463
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | ||| | || | || |||| || || ||||| || ||| | |||||
Sbjct 1982462 GATACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAGGAGGGCATCCCCCCTGACCAG 1982403
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| |||| |||| || ||||| |||||||| || | ||||| || || ||||||
Sbjct 1982402 CAGAGGCTTATTTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 1982343
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| || || |||| || || |||| || ||| |||| || |||
Sbjct 1982342 ATCCAGAAAGAGTCGACTCTCCACCTGGTTCTTCGTCTGAGGGGTGGC 1982295
>seq376
Length=1707047
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || | |||||| ||||||||| |||| | | || ||| |
Sbjct 762524 ATGCAGATCTTTGTGAAGACCCTGATGGGCAAGACCATCACCCTCGAGGCCAAGCCCAGC 762583
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | |||| ||||||| ||||| ||||| || | |||||
Sbjct 762584 GACACCATTGAGAACG-TCAAAGCTAAAATCCGAGACAACGAGGGCATCTTTCCTGACCA 762642
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||| || | | || |||||||||| || | | | ||| || || |||||
Sbjct 762643 ACAGCGTCTGACCTTTGCCAGCAAACAGCTAGAACATGGCCACACTCTGTTAGATTACAA 762702
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|| || || || | || ||||| |||||||| ||
Sbjct 762703 TATTCAGAAAGAGTCCACCCTGCACTTGGTGCTTCG 762738
>seq1935
Length=69431
Score = 84.2 bits (92), Expect = 2e-11
Identities = 101/136 (74%), Gaps = 1/136 (1%)
Strand=Plus/Plus
Query 38320 TTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACG 38379
||||||| ||||||| ||| | |||| || || | |||||||||| || |||| |
Sbjct 45174 TTAAAGACAAAATCCAAGACTAGGAGGACATCTCCCCAGACCAACAGCACCTGATTTTTG 45233
Query 38380 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGA 38439
||||||||||||||| || | | | | ||| |||||||| ||| |||| || | |
Sbjct 45234 TGGGCAAACAGCTGGAGGATGGCCACGCTCTCTCGGACTACAATATCTAAAAAGAGTCCA 45293
Query 38440 CGCTGCATTTGGTGCT 38455
| ||||| ||||||||
Sbjct 45294 C-CTGCACTTGGTGCT 45308
>seq887
Length=554748
Score = 82.4 bits (90), Expect = 8e-11
Identities = 149/212 (70%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 38246 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGA 38305
||| || || || || || || | |||||| ||||||| | | || | ||| ||| | |
Sbjct 107455 GCAGATCTTTGTGAAGACCCTGA-GGGCAAGACCATCATCCTTGAGGCTGAGCCCAGCAA 107397
Query 38306 CAGCG-TGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAAC 38364
|| | || | | | |||| ||||||| ||||||||||| || || | ||| | |
Sbjct 107396 CACCAATGAGGATG-TCAAAGCCAAAATCCAAGACAAAGAGGGCATCCCACCTGACTAGC 107338
Query 38365 AGCGG-CTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
| || ||| || |||||||||||||| || | |||| |||| |||||||||
Sbjct 107337 CTCCATCTGATTCTTGCAGGCAAACAGCTGGAGGATGGCTGCACTCTCA--GACTACAAC 107280
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
||||| || || | || |||||| |||||||
Sbjct 107279 ATCCAGAAAGAGTCCACCCTGCATGTGGTGCT 107248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500100343717760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |