Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq697 172 2e-37 seq1315 134 5e-26 seq694 132 2e-25 seq695 122 3e-22 seq517 118 4e-21 seq108 109 2e-18 seq26 102 3e-16 seq9 96.9 1e-14 seq2273 89.7 2e-12 seq164 87.8 7e-12 seq292 84.2 9e-11 >seq697 Length=863240 Score = 172 bits (190), Expect = 2e-37 Identities = 462/699 (66%), Gaps = 17/699 (2%) Strand=Plus/Minus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 || ||||| ||||| || || ||||||| || ||||| || || | ||| | || || Sbjct 424054 GCCATTGGCATTGACCTGGGCACCACCTACTCCTGTGTGGGGGTGTTCCAGCACGGCAAG 423995 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGT----TT 451029 || || || || || || ||||| || || || || || || | || || || Sbjct 423994 GTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACCCC--CA--GCTACGTGGCGTT 423939 Query 451030 TACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCCA 451088 ||||| | || | || | || | || || || | | | |||| ||| || Sbjct 423938 CACGGACACCGAGCGGCTCATCGGCGATGCGGCCAAGAGCCA-GGTAGCCATGAATCCCC 423880 Query 451089 AAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTAC 451148 | ||||| || | |||||| |||||| | |||||| | | || | ||||| | |||| Sbjct 423879 AGAACACTGTCTTTGATGCCAAACGTCTGATTGGCAGGAAGTTTAATGATCCTGTAGTAC 423820 Query 451149 AAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTA--TAT 451206 || ||| | ||| | | ||| | ||| | ||| || ||| |||||| | ||| Sbjct 423819 AATCAGATATGAAACTTTGGCCTTTCCAAGTAATCAATGAAGGAGGCAAGCCCAAGGTAT 423760 Query 451207 TCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGT 451266 | || | || ||||| || | ||| |||| |||||| ||||| || |||||||| Sbjct 423759 TGGTGTTA--TACAAAGGGGAGAAAAAAGCTTTCTATCCTGAGGAAATCTCTTCTATGGT 423702 Query 451267 TCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGT 451326 || || || ||||| || || || || | | | || || ||||| |||| || Sbjct 423701 GCTGACAAAGATGAAGGAGACTGCTGAGGCTTTTTTGGGCCACCCCGTTACCAATGCTGT 423642 Query 451327 AATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACA 451386 || ||||| || || |||||||||||| | ||||| || || || || |||||||| Sbjct 423641 GATCACTGTACCAGCATATTTCAATGATTCTCAACGCCAGGCTACCAAGGATGCAGGTGT 423582 Query 451387 TATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATA 451446 ||||| ||| | ||||| || ||||||| ||||| || || || ||||| | ||||| Sbjct 423581 AATTGCAGGTCTCAATGTGCTAAGAATTATCAATGAGCCCACCGCTGCTGCCATTGCATA 423522 Query 451447 TGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGG 451506 ||| ||| ||| | || | ||| | || | || | |||||| | ||||| Sbjct 423521 TGGCTTAGATAAAGC---AGGTCAGGGAGAGCGACATGTCTTGATCTTTGATCTAGGTGG 423465 Query 451507 AGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAAC 451566 ||| || |||| || | || | || || ||||| | ||||| || ||||| || Sbjct 423464 AGGCACATTTGATGTGTCCATCCTGACCATAGATGATGGAATTTTTGAGGTGAAGGCCAC 423405 Query 451567 CAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| || || || || ||||| || || ||||||| Sbjct 423404 GGCTGGGGACACCCACCTGGGAGGGGAGGACTTTGATAA 423366 >seq1315 Length=240589 Score = 134 bits (148), Expect = 5e-26 Identities = 345/517 (67%), Gaps = 14/517 (3%) Strand=Plus/Plus Query 451981 TAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCT 452040 ||||| | | || |||||| | |||||||| |||||||| || | || |||| || || Sbjct 186340 TAAGATCATCAACCCTGATAAGGCTGTTGCTTATGGTGCAGCTATCCAGGCAGTCATCCT 186399 Query 452041 AACAGGTT-CAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTAT 452099 | || || || |||||| | |||| | ||| | | ||||| || | || | Sbjct 186400 TTCTGGAGACAAATC-TGAAAATGTTCAAGATTTGCTGCTGTTGGATGTCACTCTGCTTT 186458 Query 452100 CTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGA----ACT 452155 ||||||| ||||||| ||||| ||| | |||||| | | || |||| | ||| Sbjct 186459 CTCTTGGCATTGAAACTGCTGGAGGAGTCATGACTGTTCTCAT----CGAGCATAATACT 186514 Query 452156 TCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTA 452215 | |||||| ||| ||| || || || | || ||| ||||| || ||||| Sbjct 186515 ACCATTCCTACCAAACAGACACAGACCTTCACTAACTACTCTGACAACCAGCCTGGTGTG 186574 Query 452216 ACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAA 452275 |||||| ||| |||||| || ||||| ||||| ||||| | ||| ||| | Sbjct 186575 CTTATTCAGATGTATGAAGGTGAGCGTGCCATGACCAAGGATAACAGCCTACTTGGAAAG 186634 Query 452276 TTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTAT 452335 ||| || || ||| |||||| || || |||||| ||||| | || | | Sbjct 186635 TTTGAACTCACAGGCATACCTCCTTCCCCTCATGGTGTTCCTCAGATTGAGGTCACTTTT 186694 Query 452336 GATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAA-ATCATCTGGAAAATC 452394 ||| ||||||| |||||||| || ||||| ||| || || || | || | |||||| Sbjct 186695 GATATTGATGCTAATGGTATCCTCAATGTCTCTGCTGTGGATAAGAACA-CAGGAAAAG- 186752 Query 452395 AGAAAAA-ATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAA 452453 |||| || ||||| || || ||||| || | || || || ||||||||||| | Sbjct 186753 AGAACAAGATTACCATCACCAATGACAAGAGCCACTTGAGCAAGGAAGATATTGAGCGCA 186812 Query 452454 TGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGA 452490 |||| | ||||| || || | ||| | ||| | ||| Sbjct 186813 TGGTCCAGGAAGCTGAGAAGTACAAAGCTGAAGGTGA 186849 >seq694 Length=814564 Score = 132 bits (146), Expect = 2e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| || || || || || || |||||||| |||||| | || Sbjct 212379 ATGCAGATTTTCGTGAAAACCCTAACGGGGAAGACCATCACTCTTGAGGTTGAACCCTCG 212320 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | | || || ||||| |||||||||||||||||||||||||| Sbjct 212319 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 212260 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | |||| || | || || ||||| ||||||||| | |||||| | || || || Sbjct 212259 CAGAGACTAATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 212200 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||| | | || ||||| | || || ||||| Sbjct 212199 ATTCAAAAGTAGTCCACTCTTCATCTTGTGTTGAGACT 212162 >seq695 Length=815165 Score = 122 bits (134), Expect = 3e-22 Identities = 159/219 (73%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTT-AAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 ||| | ||||||||| ||||| || || || || || || ||||| || |||||| | || Sbjct 16683 ATGCAGATTTTCGTTGAAAACCCTAACGGGGAAGACCATCACTCTCGAGGTTGAACCCTC 16742 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| || ||| | | || || ||||| |||||||||||||||||||||||||| Sbjct 16743 GGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCA 16802 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || | | || || | || || | ||| ||||||||| | |||||| | || || || Sbjct 16803 GCAGAGACTGATCTTTGCTGGCAAGCCACTGGAAGATGGACGTACTTTGTCTGACTACAA 16862 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | || ||||| | || || ||||| Sbjct 16863 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 16901 >seq517 Length=1171097 Score = 118 bits (130), Expect = 4e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| || || || || || || ||||| || |||||| | || Sbjct 1142414 ATGCAGATTTTCGTGAAAACCCTAACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCG 1142473 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | | || || ||||| |||||||||||||||||||||||||| Sbjct 1142474 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 1142533 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || || | || || ||||| ||||||||| | |||||| | | || || Sbjct 1142534 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTAACTACAAC 1142593 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 || | ||||| | || ||||| | || || ||||| Sbjct 1142594 TTTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 1142631 >seq108 Length=4373546 Score = 109 bits (120), Expect = 2e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| || || || || || || |||||||| | |||||| || Sbjct 1070662 ATGCAGATTTTTGTGAAAACCCTTACGGGGAAGACCATCACTCTTGAGGCTGAATCCTCA 1070603 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| | ||| | || || || || ||||||||||||||||||||| |||| Sbjct 1070602 GATAGAGTAGAAAACGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTAATCAG 1070543 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || || | || || ||||| | ||||||| ||||| || ||| || | Sbjct 1070542 CAGAGATTGATCTTGGCTGGCAAGCAACTGGCAGATGGACGAACTCTGTGGGACTACAGC 1070483 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| || || ||||| | || || ||||| Sbjct 1070482 ATTCAAAAGGAGGCCACTCTTCATCTTGTGTTGAGACT 1070445 >seq26 Length=7528108 Score = 102 bits (112), Expect = 3e-16 Identities = 156/222 (70%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||| | ||||| || || || || || || ||||| | |||||| | || Sbjct 6810585 AATGCAGATATTCATGAAAACCCTAACGGGGAAGACCATCACTCTCAAGGTTGAACCCTC 6810644 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| || ||| | | || || ||||| |||||||||||||||||||| ||||| Sbjct 6810645 GGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCCGATCA 6810704 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGA---AGAACTTTGGCGGATTA 391225 || | | || || | || || ||||| ||||||||| | |||||| | || || Sbjct 6810705 GCAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTACTTTGTCTGACTA 6810764 Query 391226 TAATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 || ||| | ||||| | || ||||| | || || ||||| Sbjct 6810765 CAACATTCAAAAGGAGTCCACTCTTCAGCTTGTGTTGAGACT 6810806 >seq9 Length=9398461 Score = 96.9 bits (106), Expect = 1e-14 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 ||||| ||||||| ||||||| || || |||||||||||||| ||||| || ||||| Sbjct 5369955 GTTACCCATGCAGTTGTTACTGTACCAGCCTATTTCAATGATGCCCAACGACAGGCAACC 5370014 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425 |||||||| || ||||||||| || |||||| | | || ||||| || || Sbjct 5370015 AAAGATGCTGGGACTATTGCTGGATTGAATGTTATGAGGATCATTAACGAGCC 5370067 >seq2273 Length=23622 Score = 89.7 bits (98), Expect = 2e-12 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 451301 ATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAA 451360 || |||||| | || | | ||||| ||||| || || || || || ||||||| || Sbjct 19726 ATAGGTTCTGCTGTAAAGAAGGCAGTTATTACAGTACCTGCATACTTTAATGATGGTCAG 19667 Query 451361 CGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAAT 451420 | ||| ||||||| ||||||| | ||||| || || | || | |||| ||||| Sbjct 19666 AGACAATCAACTAAGAATGCAGGTAAGATTGCAGGACTAGAGGTAGTAAGAATAGTTAAT 19607 Query 451421 GAACCTACAGCAGCTGCTCTAGCATATGGACTAG 451454 |||||||| || ||||| |||| |||||||||| Sbjct 19606 GAACCTACTGCTGCTGCCTTAGCTTATGGACTAG 19573 >seq164 Length=3376958 Score = 87.8 bits (96), Expect = 7e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426 || ||||| ||||| || || || |||| ||||||| ||||| | ||||||||||| Sbjct 3085816 GCCACTAAGGATGCTGGCCAGATATCTGGACTAAATGTGCTTCGGGTAATTAATGAACCC 3085875 Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGA 451467 ||||| |||||||| || ||||| |||| |||||| |||| Sbjct 3085876 ACAGCTGCTGCTCTGGCCTATGGTCTAGACAAATCAGAAGA 3085916 >seq292 Length=3256830 Score = 84.2 bits (92), Expect = 9e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || ||||| || || || || || || || || || | | Sbjct 1957967 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1957908 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| ||||| ||||| ||||||||||| || || || || || || Sbjct 1957907 GACACCATTGAGAACGTTAAAGCCAAAATCCAAGATAAGGAGGGCATCCCCCCCGACCAG 1957848 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | ||||| | || ||||| || |||||||| | ||| || | ||||| ||| Sbjct 1957847 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGATGGCCGCACTCTGTCTGATTACAAT 1957788 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | || || | || || ||||| || Sbjct 1957787 ATCCAGAAAGAGTCCACCCTGCACTTGGT 1957759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975425037305612