Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2173 82.4 9e-11 >seq2173 Length=34433 Score = 82.4 bits (90), Expect = 9e-11 Identities = 194/287 (68%), Gaps = 6/287 (2%) Strand=Plus/Plus Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATT--TTCGCGAGCGACTTCAAAGA 16122 || || ||||| |||||||||| ||||| || ||| ||| ||| ||||| | Sbjct 25307 GCGTCTATCTCGTCAATGAAGATTATGCAAGGA-GATAACTTCTT-AGCCTTCTCAAACA 25364 Query 16123 GATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAAC 16182 || | || || || || || || || |||||||| || ||||| | || | ||| Sbjct 25365 ACTCTCTAACTCGTTTTGCTCCAACCCCGACAAACATATCATCAAAGCTAGCTCCTGAAG 25424 Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242 || | |||||| ||||||||||| |||| | ||| || ||||| |||||||| | Sbjct 25425 CTTCTAAGAAGGGAACATTAGATTCTCCCGACACCGCTTTAGCTAGAAGTGTCTTACCAG 25484 Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAA-TCTTGGCGCCACTTCCAAAGTAT 16301 | ||||| || |||| | ||| |||| ||||| | ||| || | || Sbjct 25485 TCCCTGGAGGTCCATAAAGGATAACCCCTTTAGGAATTCTTGCCCCCA-TTGAAGCATAC 25543 Query 16302 CTCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTT 16348 | | |||| ||||||||||| |||||||| || || || ||||| Sbjct 25544 TTTTTAGGTCTTTTAAGAAAATCTACAATCTCCTCTAACTCTTCTTT 25590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620652477704080