Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq2173 82.4 9e-11
>seq2173
Length=34433
Score = 82.4 bits (90), Expect = 9e-11
Identities = 194/287 (68%), Gaps = 6/287 (2%)
Strand=Plus/Plus
Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATT--TTCGCGAGCGACTTCAAAGA 16122
|| || ||||| |||||||||| ||||| || ||| ||| ||| ||||| |
Sbjct 25307 GCGTCTATCTCGTCAATGAAGATTATGCAAGGA-GATAACTTCTT-AGCCTTCTCAAACA 25364
Query 16123 GATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAAC 16182
|| | || || || || || || || |||||||| || ||||| | || | |||
Sbjct 25365 ACTCTCTAACTCGTTTTGCTCCAACCCCGACAAACATATCATCAAAGCTAGCTCCTGAAG 25424
Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242
|| | |||||| ||||||||||| |||| | ||| || ||||| |||||||| |
Sbjct 25425 CTTCTAAGAAGGGAACATTAGATTCTCCCGACACCGCTTTAGCTAGAAGTGTCTTACCAG 25484
Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAA-TCTTGGCGCCACTTCCAAAGTAT 16301
| ||||| || |||| | ||| |||| ||||| | ||| || | ||
Sbjct 25485 TCCCTGGAGGTCCATAAAGGATAACCCCTTTAGGAATTCTTGCCCCCA-TTGAAGCATAC 25543
Query 16302 CTCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTT 16348
| | |||| ||||||||||| |||||||| || || || |||||
Sbjct 25544 TTTTTAGGTCTTTTAAGAAAATCTACAATCTCCTCTAACTCTTCTTT 25590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620652477704080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |