Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq86 86.0 7e-12
seq54 86.0 7e-12
>seq86
Length=5199016
Score = 86.0 bits (94), Expect = 7e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551
|||||| || || ||||||| |||||||| |||| |||| | || ||||| ||
Sbjct 130200 CTCATCTTTGCTGGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCC 130259
Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611
|| |||| ||||| ||||| || || | ||| |||||||||||||| || || ||
Sbjct 130260 CAGGTTCTGCTGGTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTACC 130319
Query 106612 CGTCTCCGTCTGTGACT 106628
||||| ||||| ||||
Sbjct 130320 TGTCTCTGTCTGAGACT 130336
>seq54
Length=5886867
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 116985 ATAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCAT 117044
||| || || |||||||||||||||||||| |||||||| || || ||| || |||||
Sbjct 1573527 ATACTCGCCTACTCGCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTCCAT 1573586
Query 117045 AAAGTCAAATGGATT 117059
|||||||||||||||
Sbjct 1573587 AAAGTCAAATGGATT 1573601
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589895333906360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |