Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_015049.1
Length=124335
Score E
Sequences producing significant alignments: (Bits) Value
seq697 89.7 4e-13
seq683 82.4 6e-11
>seq697
Length=863240
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | ||||| ||||| ||| | ||||| | | ||| || | | ||||
Sbjct 72492 CCTCATGCTGCACATGGCAGGTGTATCTCTGCTCCTCTCCAGAAGGCACCACCACAGCTG 72433
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || ||||||||||| | |||||||| ||||| || | | | |
Sbjct 72432 CCCACTTCTGGAAGGTTCCATCTCCTGTAGGTCTGGTCTCCACAAGCTCTGTGTCCTGGG 72373
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAG-CCAGTG 527
|||| | ||| | || ||||| || | ||| || |||||||| |||||| |||| |
Sbjct 72372 TCAGGTCCTCCCCATCCCGCTGCCAGGTCAGGGTGATCTCCGCAGGGTAGAAGTCCAG-G 72314
Query 528 GCCCAACATTTTAGTGTTACTTGACGGTCAG 558
||||| || | | || || | ||||||||
Sbjct 72313 GCCCAGCACCTCAAGGTGACATCACGGTCAG 72283
>seq683
Length=833057
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | ||||| || || ||| | ||||||| | ||| || | | || |
Sbjct 58917 CCTCATGCTGCACATGGCAAGTGTATCTCTGCTCTTCTCCAGAAGGCACCACCACAGCCG 58976
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || ||||||||||| | |||||||| ||||| || | | | |
Sbjct 58977 CCCACTTCTGGAAGGTTCCATCTCCTGTAGGTCTGGTCTCCACAAGCTCTGTGTCCTGGG 59036
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528
|||| | ||| | || ||||| || | || || |||||||| |||||||| ||
Sbjct 59037 TCAGGTCCTCCCCATCCTGCTGCCAGGTCAGTGTGATCTCCGCAGGGTAGAAGCCCAGGG 59096
Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAG 558
|||| || | | || || | ||||||||
Sbjct 59097 CCCAGCACCTCAAGGTGACATCACGGTCAG 59126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397691021812584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |