Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= NC_015049.1 Length=124335 Score E Sequences producing significant alignments: (Bits) Value seq697 89.7 4e-13 seq683 82.4 6e-11 >seq697 Length=863240 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| ||||| ||| | ||||| | | ||| || | | |||| Sbjct 72492 CCTCATGCTGCACATGGCAGGTGTATCTCTGCTCCTCTCCAGAAGGCACCACCACAGCTG 72433 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || ||||||||||| | |||||||| ||||| || | | | | Sbjct 72432 CCCACTTCTGGAAGGTTCCATCTCCTGTAGGTCTGGTCTCCACAAGCTCTGTGTCCTGGG 72373 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAG-CCAGTG 527 |||| | ||| | || ||||| || | ||| || |||||||| |||||| |||| | Sbjct 72372 TCAGGTCCTCCCCATCCCGCTGCCAGGTCAGGGTGATCTCCGCAGGGTAGAAGTCCAG-G 72314 Query 528 GCCCAACATTTTAGTGTTACTTGACGGTCAG 558 ||||| || | | || || | |||||||| Sbjct 72313 GCCCAGCACCTCAAGGTGACATCACGGTCAG 72283 >seq683 Length=833057 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || ||| | ||||||| | ||| || | | || | Sbjct 58917 CCTCATGCTGCACATGGCAAGTGTATCTCTGCTCTTCTCCAGAAGGCACCACCACAGCCG 58976 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || ||||||||||| | |||||||| ||||| || | | | | Sbjct 58977 CCCACTTCTGGAAGGTTCCATCTCCTGTAGGTCTGGTCTCCACAAGCTCTGTGTCCTGGG 59036 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | || || |||||||| |||||||| || Sbjct 59037 TCAGGTCCTCCCCATCCTGCTGCCAGGTCAGTGTGATCTCCGCAGGGTAGAAGCCCAGGG 59096 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAG 558 |||| || | | || || | |||||||| Sbjct 59097 CCCAGCACCTCAAGGTGACATCACGGTCAG 59126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397691021812584