Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq694 143 6e-29
seq56 141 2e-28
seq517 134 3e-26
seq695 132 1e-25
seq101 131 4e-25
seq26 123 6e-23
seq292 122 2e-22
seq376 107 4e-18
seq143 89.7 1e-12
>seq694
Length=814564
Score = 143 bits (158), Expect = 6e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981
||||||||| ||||| ||||||||||||| |||||||| ||||| || | | ||| |
Sbjct 212161 GAGTCTCAACACAAGATGAAGAGTGGACTACTTTTGAATGTTGTAGTCAGACAAAGTACG 212220
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
|||||||| || ||||| || || ||||| |||| || || || |||||||| |||||
Sbjct 212221 TCCATCTTCCAGTTGCTTGCCAGCAAAGATTAGTCTCTGCTGATCAGGAGGAATTCCTTC 212280
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
|| || ||||| || ||| || || || || || ||||| ||| || ||||| ||
Sbjct 212281 CTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCAAGAGT 212340
Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || || | ||||| ||||| | |||||
Sbjct 212341 GATGGTCTTCCCCGTTAGGGTTTTCACGAAAATCTGCAT 212379
>seq56
Length=5723395
Score = 141 bits (156), Expect = 2e-28
Identities = 167/225 (74%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | | || ||||| ||||||||||| || || |||||||| || | || ||
Sbjct 4239161 TCTGAGGCGGAGCACCAGGTGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGACAGGGT 4239220
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| ||||||||| ||||| || || || ||||| || | || ||||| || || |||||
Sbjct 4239221 GCGCCCATCTTCCAGCTGTTTCCCCGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCC 4239280
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
|||||||| || || || |||||||||||| |||||||| ||| ||||| ||
Sbjct 4239281 CTCTTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTC 4239337
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | ||||| || ||||| || || ||||| | |||||
Sbjct 4239338 CAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4239382
Score = 136 bits (150), Expect = 9e-27
Identities = 158/212 (75%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| ||||||||||| || || || ||||| || | || || | |||||||||
Sbjct 4238946 ACGAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 4239005
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||| || ||||| ||||| || | || ||||| || || ||||| ||||| |||||
Sbjct 4239006 AGCTGTTTCCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTTTCTTGG 4239065
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || ||||||||||| |||||||| ||| ||||| || ||||| | |||
Sbjct 4239066 ATCTTCCCTTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATGGTC 4239122
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || ||||| || || ||||| | |||||
Sbjct 4239123 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4239154
Score = 134 bits (148), Expect = 3e-26
Identities = 166/226 (73%), Gaps = 6/226 (3%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | | || ||||| || |||||||| || || || ||||| || | || ||
Sbjct 4239617 TCTGAGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGT 4239676
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| ||||||||| ||||| || || || ||||| || | || ||||| || || |||||
Sbjct 4239677 GCGCCCATCTTCCAGCTGTTTCCCCGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCC 4239736
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
|||||||| || || || |||||||||||| |||||||| ||| ||||| ||
Sbjct 4239737 CTCTTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTC 4239793
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
||||| | ||||| || ||||| || || ||||| | ||||||
Sbjct 4239794 CAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCATT 4239839
Score = 132 bits (146), Expect = 1e-25
Identities = 165/225 (73%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | | || ||||| || |||||||| || || || ||||| || | || ||
Sbjct 4239389 TCTGAGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGT 4239448
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| ||||||||| ||||| || || || ||||| || | || ||||| || || |||||
Sbjct 4239449 GCGCCCATCTTCCAGCTGTTTCCCCGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCC 4239508
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
|||||||| || || || |||||||||||| |||||||| ||| ||||| ||
Sbjct 4239509 CTCTTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTC 4239565
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | ||||| || ||||| || || ||||| | |||||
Sbjct 4239566 CAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4239610
>seq517
Length=1171097
Score = 134 bits (148), Expect = 3e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981
||||||||| ||||| |||||||||||||| ||||||| ||||| | | | ||| |
Sbjct 1142632 GAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAAAGTTGTAGTTAGACAAAGTACG 1142573
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
|||||||| || ||||| || || ||||| |||| || || || |||||||| |||||
Sbjct 1142572 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTC 1142513
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
|| || ||||| || ||| || || || || || ||||| ||| || || || ||
Sbjct 1142512 CTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGT 1142453
Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || || | ||||| ||||| | |||||
Sbjct 1142452 GATGGTCTTCCCCGTTAGGGTTTTCACGAAAATCTGCAT 1142414
>seq695
Length=815165
Score = 132 bits (146), Expect = 1e-25
Identities = 162/220 (74%), Gaps = 1/220 (0%)
Strand=Plus/Minus
Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981
||||||||| ||||| |||||||||||||| |||||||| ||||| || | | ||| |
Sbjct 16902 GAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACG 16843
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
|||||||| || |||| || || ||||| |||| || || || |||||||| |||||
Sbjct 16842 TCCATCTTCCAGTGGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTC 16783
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
|| || ||||| || ||| || || || || || ||||| ||| || || || ||
Sbjct 16782 CTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGT 16723
Query 195102 AACCGTCTTTCCTGTCAAAGTTTT-TACGAACACTTGCAT 195140
| ||||| || || | ||||| ||||| | |||||
Sbjct 16722 GATGGTCTTCCCCGTTAGGGTTTTCAACGAAAATCTGCAT 16683
>seq101
Length=4626942
Score = 131 bits (144), Expect = 4e-25
Identities = 157/212 (74%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || |||||||||||||| || || |||||||| | |||||| | ||||||||
Sbjct 1982542 ACCAGATGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 1982601
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || || ||||| | || ||||| || || ||||| || || || ||
Sbjct 1982602 AGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGG 1982661
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || ||| || || || |||||||| ||| ||||||||| ||||| | |||
Sbjct 1982662 ATCTTGGCCTTCACATTTTCGATGGTGTC---ACTGGGTTCCACTTCCAGGGTGATGGTC 1982718
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || |||| || || ||||| | |||||
Sbjct 1982719 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1982750
Score = 131 bits (144), Expect = 4e-25
Identities = 162/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || | || || || || || |||||||||||||| || |||||||| | ||||||
Sbjct 1982757 TCTCAGGCGCAGGACCAGATGCAGGGTGGACTCTTTTTGGATGTTGTAATCAGAAAGAGT 1982816
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||| |||||||| || || || ||||| | || ||||| || || |||||
Sbjct 1982817 GCGGCCATCTTCCAGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCC 1982876
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|| || || || || || ||| || || || |||||||| ||||||||| ||
Sbjct 1982877 CTCCTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCGCTGGGTTCCACTTCCAG 1982936
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | ||||| || |||| || || ||||| | |||||
Sbjct 1982937 GGTTATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1982978
Score = 131 bits (144), Expect = 4e-25
Identities = 158/214 (74%), Gaps = 6/214 (3%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || || ||||||||||| || || |||||||| | |||||| | ||||||||
Sbjct 1982998 ACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 1983057
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || || ||||| | || ||||| || || ||||| || || |||||
Sbjct 1983058 AGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGG 1983117
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || ||| || || || |||||||| ||| |||||| || ||||| | |||
Sbjct 1983118 ATCTTGGCCTTCACATTTTCGATGGTGTC---ACTGGGTTCCACCTCCAGGGTGATGGTC 1983174
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
|| || |||| || || ||||| | |||||||
Sbjct 1983175 TTGCCAGTCAGGGTCTTCACGAAGATCTGCATTT 1983208
>seq26
Length=7528108
Score = 123 bits (136), Expect = 6e-23
Identities = 162/222 (73%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATC-GGCAA--GAGTT 194979
|||||||| ||||| |||||||||||||| |||||||| ||||| || | ||| |||
Sbjct 6810806 AGTCTCAACACAAGCTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAGTA 6810747
Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039
| |||||||| || ||||| || || ||||| || | || || || |||||||| |||
Sbjct 6810746 CATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATTCCT 6810687
Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGG 195099
|| || || ||||| || ||| || || || || || ||||| ||| || | ||
Sbjct 6810686 TCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTTGAGA 6810627
Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|| | ||||| || || | ||||| | ||| | ||||||
Sbjct 6810626 GTGATGGTCTTCCCCGTTAGGGTTTTCATGAATATCTGCATT 6810585
>seq292
Length=3256830
Score = 122 bits (134), Expect = 2e-22
Identities = 152/207 (73%), Gaps = 6/207 (3%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || ||||||||||| || ||||||||||| | ||||| | |||||||| |||||
Sbjct 1957764 GTGCAGGGTGGACTCTTTCTGGATATTGTAATCAGACAGAGTGCGGCCATCTTCCAGCTG 1957823
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|| || || || || || || || ||||| || || ||||| || || ||||| |||||
Sbjct 1957824 TTTGCCCGCAAAAATCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCTTGGATTTT 1957883
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCC 195113
|| ||||||||||||||||| ||| || || || ||||| | ||||| ||
Sbjct 1957884 GGCTTTAACGTTCTCAATGGTGTC---ACTGGGCTCGACCTCGAGGGTGATGGTCTTGCC 1957940
Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| || || || || | |||||
Sbjct 1957941 CGTCAGGGTCTTCACAAAGATCTGCAT 1957967
>seq376
Length=1707047
Score = 107 bits (118), Expect = 4e-18
Identities = 110/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || ||||||||||| |||||||||||||| ||||| |||| ||| |||||
Sbjct 762727 GTGCAGGGTGGACTCTTTCTGAATATTGTAATCTAACAGAGTGTGGCCATGTTCTAGCTG 762668
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|| | || ||| | || || |||||||| ||| ||||| || |||||| | |||||
Sbjct 762667 TTTGCTGGCAAAGGTCAGACGCTGTTGGTCAGGAAAGATGCCCTCGTTGTCTCGGATTTT 762608
Query 195057 TTGCTTGACGTTCTCAATGGTGTC 195080
||||||||||||||||||||
Sbjct 762607 AGCTTTGACGTTCTCAATGGTGTC 762584
>seq143
Length=3665815
Score = 89.7 bits (98), Expect = 1e-12
Identities = 101/134 (75%), Gaps = 1/134 (1%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
||||||| ||| ||| ||||| ||||||||||||| |||| || | ||||| |
Sbjct 1819766 AGTCTCAGCCAAAGATGAGGAGTGAACTCTTTTTGAATGTTGT-GTCAGACAGAGTACGT 1819708
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
||||||| || ||||| || | |||||| |||| || || || |||||||| |||||
Sbjct 1819707 CCATCTTTCAGTTGCTTGCCAGAGAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCC 1819648
Query 195043 TTGTCTTGAATTTT 195056
|| || ||||| ||
Sbjct 1819647 TTATCCTGAATCTT 1819634
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109316859664763
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |