Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq948 226 2e-53 seq1315 190 2e-42 seq101 188 6e-42 seq697 161 8e-34 seq694 123 2e-22 seq695 122 7e-22 seq517 118 9e-21 seq212 116 3e-20 seq1908 109 4e-18 seq84 98.7 8e-15 seq26 91.5 1e-12 seq143 89.7 4e-12 seq108 87.8 1e-11 >seq948 Length=493525 Score = 226 bits (250), Expect = 2e-53 Identities = 408/589 (69%), Gaps = 8/589 (1%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || | ||| || ||| | ||||| | || |||| ||||| ||| Sbjct 91874 GGCATTGATCTTGGCAACACCTACTCTTGCATGGGTGTCTTCCAGCATGGGAAAGTGGAA 91933 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||||||||| || | | |||| || ||| |||||| | |||||||| || Sbjct 91934 ATAATTGCCAATGATCAGGGAACCCGAACCACCCCAAGTTATGTCGCCTTCACGGACACC 91993 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCACTGGTAATCCTACCAATACTA 550175 |||| || | |||||||| || || |||||| || || || | ||||| || Sbjct 91994 AAACAATTGATCGGTGATGCTGCGAAGAATCAAGTTGCAATG--AACTCCACCAACACAG 92051 Query 550176 TTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATA 550235 |||||||||| ||||| | |||||| | || ||| ||||| | |||| || | |||| Sbjct 92052 TTTTTGATGCCAAACGCCTGATTGGACGGAGATTTGATGATGCTGCTGTCCAATCTGATA 92111 Query 550236 TGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTC 550295 ||||||||||||||||| | || |||| | |||| | || | | ||| || Sbjct 92112 TGAAGCATTGGCCTTTCATGGTGGTGAATGATGCTGGCAGGCCAAAGGTCCAAG-TAGAA 92170 Query 550296 ATGAAGGATCTGTTAAACA-ATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAA 550354 |||| | |||| | || | ||||| | || || || |||||||| | || Sbjct 92171 TACAAGGGAGAGATAAAAAGCTTCTATCCAGAGGAGATGTCCTCCATGGTTTTGACCAAG 92230 Query 550355 ATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATAACTGT 550413 ||||| ||| || || | | |||| |||| ||||| ||||||| | || || Sbjct 92231 ATGAAGGAAATCGCAGAGGCCTATCTTGG-GAAGACTGTTACCAATGCAGTTGTCACAGT 92289 Query 550414 ACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGG 550473 ||| |||| || | ||| || || | ||| || || |||||||||||| ||||||||| Sbjct 92290 ACCCACATACTTCAGTGATTCTCAGCATCAGGCCACCAAAGATGCTGGAACTATTGCTGG 92349 Query 550474 ACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGA 550533 || ||||| ||||| || |||||||| || || |||||||| |||| ||||| | || Sbjct 92350 TCTCAATGTACTTCGAATCATCAATGAGCCAACGGCTGCTGCTATTGCTTATGGCTTAGA 92409 Query 550534 TAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 ||| | || ||| |||||| || |||||||| | |||||| Sbjct 92410 CAAAAAGGTTGGAGCTGAAAGTAATGTGCTGATCTTTGACTTAGGAGGT 92458 Score = 113 bits (124), Expect = 4e-19 Identities = 179/253 (71%), Gaps = 8/253 (3%) Strand=Plus/Plus Query 552114 CATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT--AA 552171 || || ||||| || || ||||| ||||| | ||||| || |||| || | | || Sbjct 92846 CACGATATTGTCCTGGTGGGTGGTTCTACCTGTATTCCCAAGATTCAGAAACTTCTCCAA 92905 Query 552172 GTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCT 552231 | | | |||||||| ||| || | ||| | || | || || |||||||||||||| | Sbjct 92906 GATTTC--TTCAATGGAAAAGAACTGAATAAGAGCATCAACCCTGATGAGGCTGTTGCTT 92963 Query 552232 ATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG--GACAAACTGATGAAAAACTACAAAA 552289 ||||||| || | || ||||| || ||||||| |||||| |||||| | ||| | Sbjct 92964 ATGGTGCAGCTGTCCAGGCAGCCATCCTTTCTGTAGACAAA--TCTGAAAATGTTCAAGA 93021 Query 552290 TATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTAT 552349 | | | || | ||||| ||||| || |||||||| | ||||| | |||||| | || Sbjct 93022 TTTGCTGCTGTTGGATGTCACTCCACTTTCTCTTGGCATTGAAACTGCTGGAGGAGTCAT 93081 Query 552350 GACTAATCTTATC 552362 |||| ||| ||| Sbjct 93082 GACTGTTCTCATC 93094 >seq1315 Length=240589 Score = 190 bits (210), Expect = 2e-42 Identities = 349/506 (69%), Gaps = 4/506 (1%) Strand=Plus/Plus Query 550010 GGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAAT 550069 || ||||| || ||| | ||||| | || |||| ||||| ||||| ||||||||| Sbjct 185303 GGCACCACCTACTCTTGCATGGGTGTCTTCCAGCATGGGAAAGTGGAAATAATTGCCAAT 185362 Query 550070 GATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTT 550129 ||||| || ||| |||| || ||| |||||| | |||||||| || ||| || | Sbjct 185363 GATCAGGGAAACTGAACCACCCCAAGTTATGTCGCCTTCACGGACACAGAAGGATTGATC 185422 Query 550130 GGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAA 550189 |||||||| ||||| |||||| | || || ||||| || |||||||||| ||| Sbjct 185423 GGTGATGCTGCAAAGAATCAAGTTGCGATGAACCCCACCAACACAGTTTTTGATGCCAAA 185482 Query 550190 CGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCT 550249 | |||||||| || ||| ||||| | ||| || | |||||||||||||||||| Sbjct 185483 TGCCTAATTGGACAGAGATTTGATGATGCTGTTGTCCAATCTGATATGAAGCATTGGCCT 185542 Query 550250 TTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCATGAAGGATCTGTT 550309 ||| | | |||| | |||| | || | | ||| || |||| | Sbjct 185543 TTCATGGTGGGGAATGATGCTGGCAGGCCCAAGGTCCAAG-TAGAATACAAGGGAGAGAC 185601 Query 550310 AAACA-ATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGC 550368 ||| | || | ||||| | | || ||||||||||| | || ||||| ||| || Sbjct 185602 AAAAAGCTTCTATCCAGAGGAGGTGTCCTCTATGGTTTTGACAAAGATGAAGGAAATCGC 185661 Query 550369 CAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATAACTGTACCAGCATATTTTA 550427 || | | |||| |||| || || ||||||| | || ||||| || || || | Sbjct 185662 AGAGGCCTATCTTGG-GAAGACTGTAACCAATGCAGTTGTCACAGTACCTGCGTACTTCA 185720 Query 550428 ATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTC 550487 |||| || || |||| ||||| ||| |||||||| |||||||| || ||||| |||| Sbjct 185721 ATGATTCTCAGGGTCAGGCTACCAAATATGCTGGAACAATTGCTGGTCTCAATGTACTTC 185780 Query 550488 GTATTATCAATGAACCTACTGCTGCT 550513 | || |||||||| | ||||||||| Sbjct 185781 GAATCATCAATGAGACAACTGCTGCT 185806 >seq101 Length=4626942 Score = 188 bits (208), Expect = 6e-42 Identities = 369/537 (69%), Gaps = 10/537 (2%) Strand=Plus/Minus Query 550049 AAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTC 550108 ||||| ||||| |||||||||||||| || ||| |||| || ||| |||||| | ||| Sbjct 2049885 AAAGTGGAAATAATTGCCAATGATCAGGGAAACCGAACCACCCCAAGTTATGTCACCTTC 2049826 Query 550109 ACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACC 550168 ||||| || |||| || | |||||||| ||||| |||||| | || || ||| Sbjct 2049825 ACGGACACCGAACGATTCATCGGTGATGCTGCAAAGAATCAAGTTGCGATGAACCCCACC 2049766 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 || || |||||||||| |||| | |||||| | || ||| ||||| | ||| || Sbjct 2049765 AACACAGTTTTTGATGCCAAACACCTGATTGGACGGAGATTTGATGATGCTGTTGTCCAA 2049706 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288 | |||| |||||||||||||||| | || |||| | |||| | || | | || Sbjct 2049705 TCTGATACGAAGCATTGGCCTTTCATGGTGGTAAATGATGCTGGCAGGCCCAAGGTCCAA 2049646 Query 550289 GCTACTCATGAAGGATCTGTTAAACAA--TTTTCACCAGAACAAATTTCATCTATGGTTT 550346 | || |||| | ||||| || | ||||| | || |||||||||| Sbjct 2049645 G-TAGAATACAAGGGAGAG-ACAACAAGCTTCTATCCAGAGGCGGTGTCCTCTATGGTTT 2049588 Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTA 550405 | ||| ||||| ||| || || | | |||| |||| ||||| ||||||| Sbjct 2049587 CGACGAAGATGAAGGAAATCGCAGAGGCCTATCTTGG-GAAGACTGTTACCAATGCAGTT 2049529 Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465 | || ||||| || | | | ||| | || | ||| ||||| |||||||||||| | Sbjct 2049528 GTCACAGTACCTGC--AGTCTGATGGGT--CAGCATCAGGCTACCAAAGATGCTGGAACT 2049473 Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525 |||||||| || |||| ||||| || |||||||| || ||||||||||| |||| ||| Sbjct 2049472 ATTGCTGGTCTCAATGCACTTCGAATCATCAATGAGCCAACTGCTGCTGCTGTTGCTTAT 2049413 Query 550526 GGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 || | || ||| | || ||| ||||| || |||||||| | |||||| Sbjct 2049412 GGCTTAGACAAAAAGGTTGGAGCTGAAAGGAATGTGCTGATCTTTGACTTAGGAGGT 2049356 Score = 158 bits (174), Expect = 1e-32 Identities = 529/815 (65%), Gaps = 15/815 (2%) Strand=Plus/Minus Query 551789 TGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTT 551846 |||||| | ||| | ||||| ||||| ||||| || || |||| | ||| | | || Sbjct 2049299 TGGAGACACCCATTTAGGTGGAGAAGACTTTGACAACCGAATGGTCAACCAT--TTTATT 2049242 Query 551847 GAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTCGT 551906 | ||| || || || ||| |||| | | ||| | | | | | || |||||||| Sbjct 2049241 GCAGAGTTCAAGCGCAAACACAAGGGT-ATCAGTGAAAACAAG--AGGGCAGTTCGTCGT 2049185 Query 551907 CTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATT 551966 || | |||||||| ||| | || || || | ||||| || | || || ||| || | Sbjct 2049184 CTCCGTACTGCTTGTGAACGTGCTAAGCGTCCACTTTCTTCCAGCACCCAGGCCAGTACT 2049125 Query 551967 GAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTT 552026 || | ||||| ||| ||| |||||||| | ||| ||||| | ||| ||| Sbjct 2049124 GAGATTGATTCTCTATATGAAGGAATTGACTTCTTTACCTCTATTATTTGTGCCCGGTTT 2049065 Query 552027 GAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGA 552086 ||||| | | |||| || || | || | || || | ||| ||| | | Sbjct 2049064 GAAGAATTAAATGCTGACCTGTTCCGTGGCACCCTGGACCCTGAAGAGAAAGCCCTTCGG 2049005 Query 552087 GATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGA 552146 ||| | ||| | || || || | | || || |||| || || ||||| ||||| | Sbjct 2049004 GATGCCAAGCTAGACAAGTCTCAGATCCACGATTTTGTCCTGGTGGGTGGTTCTACCTGT 2048945 Query 552147 ATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTAAATGAAA 552204 || | || |||| || | | ||| | | |||||||| ||| || | ||| | | Sbjct 2048944 ATCCTCAAGATTCAGAAACTTCTCCAAGATTTC--TTCAATGGAAAAGAACTGAATAAGA 2048887 Query 552205 GTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 | | || || ||||||||||| || |||||||| || | || ||||| || ||| ||| Sbjct 2048886 GCATCAACCCCGATGAGGCTGTAGCTTATGGTGCAGCTGTCCAGGCAGCCATCCTTCCTG 2048827 Query 552265 GACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTG 552324 || | | |||||| | ||| || | | || | ||||| ||||| | ||||||| Sbjct 2048826 GAGACAAATCTGAAAATGTTCAAGATTTGCTGCTGTTGGATGTCACTCCATTTTCTCTTG 2048767 Query 552325 GTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTT 552384 | | ||||| | ||||| | |||||| ||| || || |||||||| |||||| Sbjct 2048766 GCATTGAAACTGCTGGAG---TCATGACTGTTCTCATTGAGCATAATACTACCATTCCTA 2048710 Query 552385 GTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAA- 552443 ||| | | | || |||| | || || || || ||| ||| |||||| Sbjct 2048709 CGAAACAGACACAGACCTTCACTACCGACTCTGACAACCAGCCTGGTGTGCTTATTCAAG 2048650 Query 552444 ATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTA 552503 | | |||||| || | | || | ||||| || | |||||| | ||| | | Sbjct 2048649 GTGTATGAAGGTGAGCGTGCCATGACCAGGGATAACAACCTACTTGGAAAGTTTGAACTC 2048590 Query 552504 GAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGAT 552563 ||| || |||||||| |||||||| || || || ||||| || ||||| ||||| ||| Sbjct 2048589 ACAGGCATACCTCCTGCCCCTCGTGGTGTTCCTCAGATTGAGGTCACTTTTGATATTGAT 2048530 Query 552564 GCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 || ||||| || | | ||| ||||| ||||| Sbjct 2048529 GCTAATGGTATCCTCAGTGTCTCTGCTGTGGATAA 2048495 Score = 91.5 bits (100), Expect = 1e-12 Identities = 158/225 (70%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| || || || || ||||| ||||| ||| | | ||| || |||||||||| ||| Sbjct 1982985 CCTCAGGCGCAGGACCAGATGCAGGGTGGACTCTTTCTGG--ATGTTGTAATCAGAAAGA 1983042 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || | |||||| || || || |||||||||||||| || ||||| ||||| || || Sbjct 1983043 GTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATG 1983102 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429 || || |||||||| || || || || || || || ||| || | | || || Sbjct 1983103 CCCTCCTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTG-GGTTCCACCTC 1983161 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || | || || ||||| || || || ||||| || ||||| Sbjct 1983162 CAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 1983206 Score = 87.8 bits (96), Expect = 1e-11 Identities = 157/225 (70%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| ||||| || || || || || || ||| | | ||| || |||||||||| ||| Sbjct 1982301 CCTCAGACGAAGAACCAGGTGGAGAGTCGACTCTTTCTGG--ATGTTGTAATCAGAAAGA 1982358 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || | |||||| || || || || ||||||||||| || ||||| ||||| || || Sbjct 1982359 GTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATG 1982418 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTG-AGTACATTC 563429 || || |||||||| || || || || || || |||||| || | ||| ||| Sbjct 1982419 CCCTCCTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTATCACTGGGCTCTAC-TTC 1982477 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || | || || || || || || || ||||| || ||||| Sbjct 1982478 TAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1982522 Score = 87.8 bits (96), Expect = 1e-11 Identities = 104/139 (75%), Gaps = 4/139 (3%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAG 563311 || || || || || ||||| ||||| ||| | ||||| || |||||||||| |||| Sbjct 1982758 CTCAGGCGCAGGACCAGATGCAGGGTGGACTCTTTTTGG--ATGTTGTAATCAGAAAGAG 1982815 Query 563312 TTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTC 563371 | | |||||| || || || |||||||||||||| || ||||| ||||| || || | Sbjct 1982816 TGCGGCCATCTTCCAGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGC 1982875 Query 563372 CTTCTTTATCTTGAATTTT 563390 | || ||||| || || || Sbjct 1982876 CCTCCTTATCCTGGATCTT 1982894 >seq697 Length=863240 Score = 161 bits (178), Expect = 8e-34 Identities = 373/554 (67%), Gaps = 16/554 (3%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || || || || | || ||||| || ||||| || || | || | || || Sbjct 424054 GCCATTGGCATTGACCTGGGCACCACCTACTCCTGTGTGGGGGTGTTCCAGCACGGCAAG 423995 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || || ||||| || || || ||| | || || || || || | |||||| Sbjct 423994 GTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACCCCCAGCTACGTGGCGTTCACG 423935 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTACC 550168 || || || | | | || ||||| || || || ||||| || ||||| Sbjct 423934 GACACCGAGCGGCTCATCGGCGATGCGGCCAAGAGCCAGGTAGCCA-TG--AATCCCCAG 423878 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 || ||| | |||||||| |||||| | ||||| || | ||||||||| | || || Sbjct 423877 AACACTGTCTTTGATGCCAAACGTCTGATTGGCAGGAAGTTTAATGATCCTGTAGTACAA 423818 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTA--TATTG 550286 |||||||||| | ||||||||||||| | | |||| || || || | ||||| Sbjct 423817 TCAGATATGAAACTTTGGCCTTTCCAAGTAATCAATGAAGGAGGCAAGCCCAAGGTATTG 423758 Query 550287 AAGCTACTCATGAAGGATCTGTTAAACAAT-TTTCA--CCAGAACAAATTTCATCTATGG 550343 | || || |||| | ||| || |||| || || |||| || ||||||| Sbjct 423757 GTGTTATACA--AAGGG---GAGAAAAAAGCTTTCTATCCTGAGGAAATCTCTTCTATGG 423703 Query 550344 TTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAG 550403 | | | || ||||| | || || |||||| | || || ||||| |||| | Sbjct 423702 TGCTGACAAAGATGAAGGAGACTGCTGAGGCTTTTTTGGGCCACCCCGTTACCAATGCTG 423643 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 | || ||||||||||||||||| ||||| || ||||| || ||||| || ||||| || Sbjct 423642 TGATCACTGTACCAGCATATTTCAATGATTCTCAACGCCAGGCTACCAAGGATGCAGGTG 423583 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 ||||| || || ||||| || | ||||||||||| || || |||||||| |||||| Sbjct 423582 TAATTGCAGGTCTCAATGTGCTAAGAATTATCAATGAGCCCACCGCTGCTGCCATTGCAT 423523 Query 550524 ATGGACTTGATAAA 550537 |||| | |||||| Sbjct 423522 ATGGCTTAGATAAA 423509 >seq694 Length=814564 Score = 123 bits (136), Expect = 2e-22 Identities = 155/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 ||||||||||| || ||| |||| ||| ||||| |||| | ||| | | ||||| Sbjct 212171 ACAAGATGAAGAGTGGACTACTTTTG--AATGTTGTAGTCAGACAAAGTACGTCCATCTT 212228 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || || ||||| || ||||| ||||||||||||||||||||||| ||||| | Sbjct 212229 CCAGTTGCTTGCCAGCAAAGATTAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCT 212288 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443 |||| || ||||| || |||||||| | | | | || ||||| | || | Sbjct 212289 GAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCAAGAGTGATGGTCT 212348 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || ||||| |||||||| ||||| Sbjct 212349 TCCCCGTTAGGGTTTTCACGAAAATCTGCAT 212379 >seq695 Length=815165 Score = 122 bits (134), Expect = 7e-22 Identities = 156/212 (74%), Gaps = 5/212 (2%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 ||||||||||| || ||| |||| ||| ||||| |||| | ||| | | ||||| Sbjct 16892 ACAAGATGAAGAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAAAGTACGTCCATCTT 16835 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||| | || || ||||| || ||||| ||||||||||||||||||||||| ||||| | Sbjct 16834 CCAGTGGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCT 16775 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443 |||| || ||||| || |||||||| | | | | |||||||| | || | Sbjct 16774 GAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGTCT 16715 Query 563444 TACCAGTAAGAGTTTT-AACGAAAATTTGCAT 563474 | || || || ||||| ||||||||| ||||| Sbjct 16714 TCCCCGTTAGGGTTTTCAACGAAAATCTGCAT 16683 >seq517 Length=1171097 Score = 118 bits (130), Expect = 9e-21 Identities = 154/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 ||||||||||| || ||| |||| || ||||| | || | ||| | | ||||| Sbjct 1142622 ACAAGATGAAGAGTGGACTCCTTTTG--AAAGTTGTAGTTAGACAAAGTACGTCCATCTT 1142565 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || || ||||| || ||||| ||||||||||||||||||||||| ||||| | Sbjct 1142564 CCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCT 1142505 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443 |||| || ||||| || |||||||| | | | | |||||||| | || | Sbjct 1142504 GAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGTCT 1142445 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || ||||| |||||||| ||||| Sbjct 1142444 TCCCCGTTAGGGTTTTCACGAAAATCTGCAT 1142414 >seq212 Length=2881378 Score = 116 bits (128), Expect = 3e-20 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| ||||||| | || ||||| || || || ||||| || || ||||| ||||| Sbjct 2399694 GTTACTAATGCAGTTGTCACAGTACCTGCGTACTTCAATGATTCTCAGCGTCAGGCTACC 2399753 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||||||| ||||||||| || ||||| ||| | || |||||||| || |||||| Sbjct 2399754 AAAGATGCTGGAACTATTGCTGGTCTCAATGTACTTAGGATCATCAATGAGCCAACTGCT 2399813 Query 550511 GCTGCACTTGCATATGG 550527 ||||| | || ||||| Sbjct 2399814 GCTGCTATCGCTTATGG 2399830 Score = 93.3 bits (102), Expect = 3e-13 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| || ||| || ||||| | || | || ||||| ||| Sbjct 2398826 GGCATTGATCTTGGCACCACCTACTCTTGCGTGGGTGTCTTCCAGCACGGGAAAGTGGAA 2398885 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||||||||| || ||| |||| || ||| |||||| | |||||||| || Sbjct 2398886 ATAATTGCCAATGATCAGGGAAACCGAACCACCCCAAGTTATGTCGCCTTCACGGACACC 2398945 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAG 550151 |||| || | |||||||| || || |||||| Sbjct 2398946 GAACGATTGATCGGTGATGCTGCGAAGAATCAAG 2398979 Score = 93.3 bits (102), Expect = 3e-13 Identities = 227/342 (66%), Gaps = 4/342 (1%) Strand=Plus/Plus Query 551899 TTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAA 551958 |||||||||| | |||||||| ||| | || || || | ||||| || | || || Sbjct 2400150 TTCGTCGTCTCCGTACTGCTTGTGAACGTGCTAAGCGTACACTTTCTTCCAGCACCCAGG 2400209 Query 551959 CCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGG 552018 ||| |||||| | ||||| ||| ||| ||||| || | |||| ||||| | | | Sbjct 2400210 CCAGTATTGAGATTGATTCTCTATATGAAGGAATCGACTTCTATACCTCTATTACTCGTG 2400269 Query 552019 CCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAG 552078 || |||||||| | | |||| || || | || | || || ||||| ||| Sbjct 2400270 CCCGGTTTGAAGAATTAAATGCTGACCTGTTCCGTGGCACCCTGGACCCTGTAGAGAAAG 2400329 Query 552079 TTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGAT 552138 | | ||| | ||| | || || || | | || || ||||| || || ||||| | Sbjct 2400330 CCCTTCGGGATGCCAAGCTAGACAAGTCTCAGATCCACGATATTGTCCTGGTGGGTGGTT 2400389 Query 552139 CTACAAGAATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATT 552196 |||| | || || || |||| || | | ||| | | |||||||| ||| || | Sbjct 2400390 CTACCCGTATCCCCAAGATTCAGAAACTTCTCCAAGATTTC--TTCAATGGAAAAGAACT 2400447 Query 552197 AAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGC 552238 ||| | || | || || |||||||||||||| |||||||| Sbjct 2400448 GAATAAGAGCATCAACCCTGATGAGGCTGTTGCGTATGGTGC 2400489 >seq1908 Length=73492 Score = 109 bits (120), Expect = 4e-18 Identities = 149/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 550049 AAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTC 550108 ||||| ||||| ||| || |||||| || ||| |||| || ||| ||||| | ||| Sbjct 68451 AAAGTGGAAATAATTTTCAGTGATCAGGGAAACTGAACCACCCCAAGTTATGGCACCTTC 68392 Query 550109 ACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAATCCTA 550166 ||||| || |||| || | |||||||| ||||| |||||| || || || || | Sbjct 68391 ACGGACACAGAACGATTGATCGGTGATGCTGCAAAGAATCAAGTTGCAATG--AACCCCA 68334 Query 550167 CCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTC 550226 |||| || |||||||| | ||| | | |||||| || ||| ||||| | ||| | Sbjct 68333 CCAACACAGTTTTTGATACCAAATGCCTGATTGGACAGAGATTTGATGATGCTGTTGTCC 68274 Query 550227 AGGCAGATATGAAGCATTGGCCTTTC 550252 | | || |||||||||||||||||| Sbjct 68273 AATCTGAAATGAAGCATTGGCCTTTC 68248 >seq84 Length=4826052 Score = 98.7 bits (108), Expect = 8e-15 Identities = 130/178 (73%), Gaps = 7/178 (4%) Strand=Plus/Plus Query 563301 ATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATC 563360 ||||| || ||| | | |||||| |||||||| | ||||| || ||||| ||| |||| Sbjct 1438955 ATCAGATAAAGTACGTCTATCTTCCAGTTGTTTGGCAGCAAAGATCAGTCTCTGCAGATC 1439014 Query 563361 AGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTG 563420 ||||||||||||||| ||||| ||||| ||| ||||| || |||||||| || | Sbjct 1439015 AGGAGGAATTCCTTCCTTATCCTGAATCTTTGCCTTTACATTTTCTATTGTATC--TGAG 1439072 Query 563421 AGTACATTCGAGAGTAACAGT----TTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || | ||| || | | || || ||||| ||||| | |||||| ||||| Sbjct 1439073 GGTTCAACCTAGA-TAGCGATGGCCTTCCCCGGTAAGGGTTTTCATGAAAATCTGCAT 1439129 >seq26 Length=7528108 Score = 91.5 bits (100), Expect = 1e-12 Identities = 150/214 (70%), Gaps = 7/214 (3%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGA---AT 563320 ||||| ||||| || ||| |||| ||| ||||| |||| | ||| | | || Sbjct 6810797 ACAAGCTGAAGAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAAAGTAGTACATCCAT 6810740 Query 563321 CTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTAT 563380 |||| ||||| || || ||||| || || || |||||||| |||||||||||||| |||| Sbjct 6810739 CTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATTCCTTCCTTAT 6810680 Query 563381 CTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAG 563440 | ||||| || ||||| || |||||||| | | | | | |||||| | | Sbjct 6810679 CCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTTGAGAGTGATGG 6810620 Query 563441 TTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || || ||||| | ||| || ||||| Sbjct 6810619 TCTTCCCCGTTAGGGTTTTCATGAATATCTGCAT 6810586 >seq143 Length=3665815 Score = 89.7 bits (98), Expect = 4e-12 Identities = 111/149 (74%), Gaps = 5/149 (3%) Strand=Plus/Minus Query 563268 AAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325 ||||||| | || ||| | |||| ||| |||| |||| ||||| | | ||||| Sbjct 1819755 AAGATGAGGAGTGAACTCTTTTTG--AATGTTGTG-TCAGACAGAGTACGTCCATCTTTC 1819699 Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGA 563385 ||||| || || | || || ||||| ||||||||||||||||||||||| ||||| ||| Sbjct 1819698 AGTTGCTTGCCAGAGAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGA 1819639 Query 563386 ATTTTTTGTTTTACTGCCTCAATTGTATC 563414 || || ||||| | || |||||||| Sbjct 1819638 ATCTTGGCCTTTACAGTTTCTATTGTATC 1819610 >seq108 Length=4373546 Score = 87.8 bits (96), Expect = 1e-11 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGT-ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324 ||||||||||| || | | |||| | ||| |||| || ||||||| | |||| | Sbjct 1070454 ACAAGATGAAGAGTGGCCTCCTTTTG-AATGCTGTAGTCCCACAGAGTTCGTCCATCTGC 1070512 Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 ||||| || || || || || | ||| ||||||| ||||||||||||||| ||||| || Sbjct 1070513 CAGTTGCTTGCCAGCCAAGATCAATCTCTGCTGATTAGGAGGAATTCCTTCCTTATCCTG 1070572 Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAACAGTTT 563443 || || ||||| || | | |||| | | || | | || ||||| | || | Sbjct 1070573 GATCTTGGCCTTTACGTTTTCTACTCTATCTGAG-GATTCAGCCTCAAGAGTGATGGTCT 1070631 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || ||||| ||||| || ||||| ||||| Sbjct 1070632 TCCCCGTAAGGGTTTTCACAAAAATCTGCAT 1070662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028683121413610