Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq26 118 8e-22
seq292 116 3e-21
seq1820 91.5 1e-13
>seq26
Length=7528108
Score = 118 bits (130), Expect = 8e-22
Identities = 150/206 (73%), Gaps = 3/206 (1%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGA---TAGTTCTGGCATCGTCCAAT 101323
||||| || || || ||||| || ||||| || | | |||| | |||| |||| |
Sbjct 6810791 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAGTACATCCATCTTCCAGT 6810732
Query 101324 TGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATT 101383
||||| || ||||| |||| | ||| |||||||| ||||| ||||| ||||| |||||
Sbjct 6810731 TGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATTCCTTCCTTATCCTGAATC 6810672
Query 101384 TTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCG 101443
|| |||||| |||||| || || || | ||| || | ||||||| || || ||
Sbjct 6810671 TTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTTGAGAGTGATGGTCTTCCCC 6810612
Query 101444 GTTAAAGTTTTTACAAATATCTGCAT 101469
|||| ||||| | |||||||||||
Sbjct 6810611 GTTAGGGTTTTCATGAATATCTGCAT 6810586
>seq292
Length=3256830
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || || ||||| || ||||| || ||||||||||| | | ||| | | |||| |||
Sbjct 1957759 ACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAATCAGACAGAGTGCGGCCATCTTCC 1957818
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| || || || ||||| |||| |||||| || ||||| || ||||| || ||||||||
Sbjct 1957819 AGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCTTGG 1957878
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
||||| ||| || | || | |||||| | || || || || |||| || |||
Sbjct 1957879 ATTTTGGCTTTAACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 1957938
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || | || || ||||| ||||||||
Sbjct 1957939 CCCGTCAGGGTCTTCACAAAGATCTGCAT 1957967
>seq1820
Length=90317
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| || || || ||||| || | |||||||| | | ||| | | |||| |||| |||
Sbjct 66957 TGGAGAGTCGACTCTTTCTGGAGGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGC 66898
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || ||||| || | | ||| || ||||| | |||| ||||||||||| || ||
Sbjct 66897 TTGCCGGCAAAGATAAGCCTCTGCTGGTCGGGGCGGATGCACTCTTTATCTTGGATCTTG 66838
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| |||| | |||||| | |||||| || || |||| || ||||| ||
Sbjct 66837 GCCTTCACAGTTTCGATTGTGTCACTGGGTTCCACCTCCAGGGTGATGGTCTTGCCAGTC 66778
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| || || || || ||||||||
Sbjct 66777 AGTGTCTTCACGAAAATCTGCAT 66755
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396222429267273
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |