Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq694 120 5e-22
seq517 111 3e-19
seq695 105 1e-17
seq101 91.5 3e-13
>seq694
Length=814564
Score = 120 bits (132), Expect = 5e-22
Identities = 154/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 193152 ACCAGATGCAATGTAGCCT-CTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTC 193210
|| ||||| | || | || |||| ||| | || ||||| || || || | ||| ||
Sbjct 212171 ACAAGATGAAGAGTGGACTACTTTTGAA-TGTTGTAGTCAGACAAAGTACGTCCATCTTC 212229
Query 193211 TAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTG 193270
| ||| || || ||||| |||| |||||| ||||||||||| |||||||| ||||| ||
Sbjct 212230 CAGTTGCTTGCCAGCAAAGATTAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTG 212289
Query 193271 TATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTT 193330
|| |||| |||| |||| || ||||| || | ||||| || ||||| || || ||
Sbjct 212290 AATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCAAGAGTGATGGTCTT 212349
Query 193331 ACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| ||||| ||||| || || || |||||
Sbjct 212350 CCCCGTTAGGGTTTTCACGAAAATCTGCAT 212379
>seq517
Length=1171097
Score = 111 bits (122), Expect = 3e-19
Identities = 118/156 (76%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264
||| || | ||| || || ||||| || | |||||| ||||||||||| |||||||| ||
Sbjct 1142569 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTT 1142510
Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324
||| || || |||| |||| |||| || ||||| || | ||||| || ||||| ||
Sbjct 1142509 ATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGAT 1142450
Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || ||||| ||||| || || || |||||
Sbjct 1142449 GGTCTTCCCCGTTAGGGTTTTCACGAAAATCTGCAT 1142414
>seq695
Length=815165
Score = 105 bits (116), Expect = 1e-17
Identities = 150/210 (71%), Gaps = 1/210 (0%)
Strand=Plus/Minus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
|| ||||| | || | ||| || ||| || ||||| || || || | ||| ||
Sbjct 16892 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCC 16833
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| | | || || ||||| || | |||||| ||||||||||| |||||||| ||||| ||
Sbjct 16832 AGTGGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGA 16773
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
|| |||| |||| |||| || ||||| || | ||||| || ||||| || || ||
Sbjct 16772 ATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGTCTTC 16713
Query 193332 CCTGTTAGCGTTTT-TACAAATATTTGCAT 193360
|| ||||| ||||| || || || |||||
Sbjct 16712 CCCGTTAGGGTTTTCAACGAAAATCTGCAT 16683
>seq101
Length=4626942
Score = 91.5 bits (100), Expect = 3e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| |||||||||| || || |||||||||| || | |||||| || || || ||
Sbjct 1982749 ATGCCACCTCTCAGGCGCAGGACCAGATGCAGGGTGGACTCTTTTTGGATGTTGTAATCA 1982808
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | ||| || | || || ||||||||||| | ||||| || |||||
Sbjct 1982809 GAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGG 1982868
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || || || ||||| || || |||| || | |||| || || ||| | ||
Sbjct 1982869 GGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCGCTGGGTTCC 1982928
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || ||||| || || || || || || || || || || |||||
Sbjct 1982929 ACTTCCAGGGTTATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1982978
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899524073814480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |