Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq694 136 8e-27
seq695 125 1e-23
seq517 122 2e-22
seq26 114 3e-20
seq101 89.7 1e-12
>seq694
Length=814564
Score = 136 bits (150), Expect = 8e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATATTATAATCAG 192367
|||||| | || | || || | ||| | ||| | || |||| || || || || ||||
Sbjct 212152 ACCACCACGGAGTCTCAACACAAGATGAAGAGTGGACTACTTTTGA-ATGTTGTAGTCAG 212210
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || || ||| |||| |||| ||| || ||||||||||||| |||||| |||||||| |
Sbjct 212211 ACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATTAGTCTCTGCTGATCAGGAG 212270
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| |||||||| ||||| || || || |||||||| ||| | ||| || | ||| |
Sbjct 212271 GAATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAA 212330
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
| || ||||| ||||| || || |||| ||||| | || ||||||||
Sbjct 212331 CCTCAAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAAATCTGCAT 212379
>seq695
Length=815165
Score = 125 bits (138), Expect = 1e-23
Identities = 168/230 (73%), Gaps = 3/230 (1%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
|||||| | || | || || | ||| | ||| | ||| ||| || || || || ||||
Sbjct 16911 ACCACCACGGAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGA-ATGTTGTAGTCAG 16853
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || || ||| |||| |||| | | || ||||||||||| | |||||| |||||||| |
Sbjct 16852 ACAAAGTACGTCCATCTTCCAGTGGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAG 16793
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| |||||||| ||||| || || || |||||||| ||| | ||| || | ||| |
Sbjct 16792 GAATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAA 16733
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT-AATAAATATCTGCAT 192536
| || ||||| ||||| || || |||| ||||| || || ||||||||
Sbjct 16732 CCTCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCAACGAAAATCTGCAT 16683
>seq517
Length=1171097
Score = 122 bits (134), Expect = 2e-22
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
|||||| | || | || || | ||| | ||| | ||| ||| || | || || | ||
Sbjct 1142641 ACCACCACGGAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAAAG-TTGTAGTTAG 1142583
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || || ||| |||| |||| ||| || ||||||||||| | |||||| |||||||| |
Sbjct 1142582 ACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAG 1142523
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| |||||||| ||||| || || || |||||||| ||| | ||| || | ||| |
Sbjct 1142522 GAATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAA 1142463
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
| || ||||| ||||| || || |||| ||||| | || ||||||||
Sbjct 1142462 CCTCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAAATCTGCAT 1142414
>seq26
Length=7528108
Score = 114 bits (126), Expect = 3e-20
Identities = 167/233 (72%), Gaps = 5/233 (2%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
|||||| | ||| | || || | || | ||| | ||| ||| || || || || ||||
Sbjct 6810816 ACCACCACGAAGTCTCAACACAAGCTGAAGAGTGGACTCCTTTTGA-ATGTTGTAGTCAG 6810758
Query 192368 ATAATGTT---CGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAG 192424
| || || | | |||| |||| ||| || ||||||||||| | ||||| ||||| |
Sbjct 6810757 ACAAAGTAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGG 6810698
Query 192425 GTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATT 192484
| || |||||||| ||||| || || || |||||||| ||| | ||| || | ||
Sbjct 6810697 GAGGAATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTT 6810638
Query 192485 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
| || | ||||| ||||| || || |||| ||||| || ||||||||||||
Sbjct 6810637 CAACCTTGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCATGAATATCTGCATT 6810585
>seq101
Length=4626942
Score = 89.7 bits (98), Expect = 1e-12
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
||||| || ||||| | || | || | ||| | |||||| ||| || ||||||||
Sbjct 1982296 CCACCCCTCAGACGAAGAACCAGGTGGAGAGTCGACTCTTTCTGGATGTTGTAATCAGAA 1982355
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
| || || |||| |||| || || |||||||| || | ||||| || ||||| ||
Sbjct 1982356 AGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAAATAAGCCTCTGCTGGTCAGGGGGG 1982415
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489
|| || || |||||||| || || || ||||| || | ||| | ||||||
Sbjct 1982416 ATGCCCTCCTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTATCACTGGGCTCTACT 1982475
Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| || ||||| || || || | || || | || ||||||||
Sbjct 1982476 TCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1982522
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984333820410150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |