Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq26 113 8e-20
seq101 89.7 9e-13
>seq26
Length=7528108
Score = 113 bits (124), Expect = 8e-20
Identities = 170/241 (71%), Gaps = 3/241 (1%)
Strand=Plus/Minus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || |||||| | ||||| || || | || | ||| | ||| || ||| ||
Sbjct 6810825 TTTCTTAGCACCACCACGAAGTCTCAACACAAGCTGAAGAGTGGACTCCTTTTGAATGTT 6810766
Query 171893 ATAATCTGATAAAGAT---CGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTG 171949
|| || || |||| | | | || |||| ||| || |||||||| || | |||||
Sbjct 6810765 GTAGTCAGACAAAGTAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTG 6810706
Query 171950 TTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATC 172009
|| || || || |||||||| ||||| || || || |||||||| ||| |||||
Sbjct 6810705 CTGATCGGGAGGAATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATC 6810646
Query 172010 TGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| | ||| || | ||||| ||||| || || |||| ||||| ||||||||||||||
Sbjct 6810645 CGAGGGTTCAACCTTGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCATGAATATCTGCAT 6810586
Query 172070 T 172070
|
Sbjct 6810585 T 6810585
>seq101
Length=4626942
Score = 89.7 bits (98), Expect = 9e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902
||||| || || || | || | || | ||| | |||||| || || ||||| ||
Sbjct 1982296 CCACCCCTCAGACGAAGAACCAGGTGGAGAGTCGACTCTTTCTGGATGTTGTAATCAGAA 1982355
Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962
| || || | || |||| || || ||||||||||| | ||||| |||||||| ||
Sbjct 1982356 AGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAAATAAGCCTCTGCTGGTCAGGGGGG 1982415
Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022
|| || || |||||||| || || || ||||| || ||||| | ||||||
Sbjct 1982416 ATGCCCTCCTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTATCACTGGGCTCTACT 1982475
Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| || ||||| || || || | || || | ||| ||||||||
Sbjct 1982476 TCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1982522
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905004879736200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |