Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= NC_021781.2 Length=135281 Score E Sequences producing significant alignments: (Bits) Value seq2540 87.8 2e-12 seq1848 84.2 2e-11 >seq2540 Length=9893 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 39056 GCTGGTCTAGTTGGATTCGAACCAACGTATCACGGAATCAAAATCCGTTGCCTTACCGCT 39115 ||||| || | |||||||||||| || |||| ||| ||||| ||| ||||||||||||| Sbjct 6490 GCTGGGCTGGAGGGATTCGAACCATCGCATCATGGAGTCAAAGTCCATTGCCTTACCGCT 6431 Query 39116 TGGCTACAGACCAATA 39131 ||||||||| |||||| Sbjct 6430 TGGCTACAGCCCAATA 6415 >seq1848 Length=83282 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 39056 GCTGGTCTAGTTGGATTCGAACCAACGTATCACGGAATCAAAATCCGTTGCCTTACCGCT 39115 ||||| || | |||||||||||| || |||| ||| ||||| ||| ||||||||||||| Sbjct 81272 GCTGGGCTGGAGGGATTCGAACCATCGCATCATGGAGTCAAAGTCCATTGCCTTACCGCT 81213 Query 39116 TGGCTACAGACCAA 39129 ||||||||| |||| Sbjct 81212 TGGCTACAGCCCAA 81199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432713274538018