Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_023719.1
Length=497513
Score E
Sequences producing significant alignments: (Bits) Value
seq1753 91.5 5e-13
>seq1753
Length=106182
Score = 91.5 bits (100), Expect = 5e-13
Identities = 264/405 (65%), Gaps = 6/405 (1%)
Strand=Plus/Minus
Query 54156 CAACCAGCTACTCCAACTTTCCTAAATGCTGGTAGAAGCAGACGCGGAGAAATGGTTTCT 54215
|| || |||||||||||||| ||||| || | | || ||||| |||||||
Sbjct 73818 CAGCCGGCTACTCCAACTTTTTCTAATGCAGGCAAGAAAAGGTCTGGAGAGTTGGTTTCC 73759
Query 54216 TGTTTCTTATTAGAAATGGATGATAGCTTGAATTCAATTGGTTTCAATATCAAT---ACT 54272
||||| || | |||| || ||| | || || ||| | |||| | | ||
Sbjct 73758 TGTTTTTTGCTGGAAACAGAAGATTCTATCAACTCGATTAACT---ATATAATTTCGACC 73702
Query 54273 GCAATGCAATTATCTAAAATTGGCGGCGGCGTTGCCTTAAACCTTTCTAAACTTAGAGGA 54332
|||||||| |||| ||||| || || || || || |||| ||||| |||||||||||
Sbjct 73701 TCAATGCAACTATCAAAAATCGGAGGAGGGGTAGCTGTAAATCTTTCGAAACTTAGAGGC 73642
Query 54333 AGAAAAGAGCAAATTAAAGGTATTGATGATGCTGCTTCTGGAGTAGTACCAGTTATGAAA 54392
|| || || ||| |||||| | | ||||| || || | || ||| | |||
Sbjct 73641 AGGGGAGCCTCTATCAAAAAAATTGATAGTACCGCTTCAGGGGTCTTGCCTGTTTTAAAA 73582
Query 54393 CTTTTAGAAGATAGCTTCTCTTATGCTAATCAGCTTGGCCAAAGAAAAGGCGCTGGAGCT 54452
|||| ||| || || ||||| |||| | || || ||| ||| ||
Sbjct 73581 ATTTTGGAAAATGTTTTTGACTATGCAGATCAATTGGGAATGAGGCGAGGAAGTGGCGCA 73522
Query 54453 GTTTACTTAAACATCTTCCACTGGGATATTATTGAATTCTTAGATACTAAAAAGATCAAT 54512
| ||| | | || || |||| || | ||||| || | || |||||| ||||||
Sbjct 73521 GCTTATCTTAGTATTTTTCACTACGACTTAATTGACTTTATTGACTGTAAAAAAATCAAT 73462
Query 54513 GCTGATGAAAAAGCCAGAATTCAATCTTTATCTATTGGATTAATT 54557
|| |||||||| | ||||| ||| | | || || |||||||||
Sbjct 73461 GCAGATGAAAAGTCTAGAATCCAAACACTCTCAATAGGATTAATT 73417
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1591674026676672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |