Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq1753 91.5 5e-13 >seq1753 Length=106182 Score = 91.5 bits (100), Expect = 5e-13 Identities = 264/405 (65%), Gaps = 6/405 (1%) Strand=Plus/Minus Query 54156 CAACCAGCTACTCCAACTTTCCTAAATGCTGGTAGAAGCAGACGCGGAGAAATGGTTTCT 54215 || || |||||||||||||| ||||| || | | || ||||| ||||||| Sbjct 73818 CAGCCGGCTACTCCAACTTTTTCTAATGCAGGCAAGAAAAGGTCTGGAGAGTTGGTTTCC 73759 Query 54216 TGTTTCTTATTAGAAATGGATGATAGCTTGAATTCAATTGGTTTCAATATCAAT---ACT 54272 ||||| || | |||| || ||| | || || ||| | |||| | | || Sbjct 73758 TGTTTTTTGCTGGAAACAGAAGATTCTATCAACTCGATTAACT---ATATAATTTCGACC 73702 Query 54273 GCAATGCAATTATCTAAAATTGGCGGCGGCGTTGCCTTAAACCTTTCTAAACTTAGAGGA 54332 |||||||| |||| ||||| || || || || || |||| ||||| ||||||||||| Sbjct 73701 TCAATGCAACTATCAAAAATCGGAGGAGGGGTAGCTGTAAATCTTTCGAAACTTAGAGGC 73642 Query 54333 AGAAAAGAGCAAATTAAAGGTATTGATGATGCTGCTTCTGGAGTAGTACCAGTTATGAAA 54392 || || || ||| |||||| | | ||||| || || | || ||| | ||| Sbjct 73641 AGGGGAGCCTCTATCAAAAAAATTGATAGTACCGCTTCAGGGGTCTTGCCTGTTTTAAAA 73582 Query 54393 CTTTTAGAAGATAGCTTCTCTTATGCTAATCAGCTTGGCCAAAGAAAAGGCGCTGGAGCT 54452 |||| ||| || || ||||| |||| | || || ||| ||| || Sbjct 73581 ATTTTGGAAAATGTTTTTGACTATGCAGATCAATTGGGAATGAGGCGAGGAAGTGGCGCA 73522 Query 54453 GTTTACTTAAACATCTTCCACTGGGATATTATTGAATTCTTAGATACTAAAAAGATCAAT 54512 | ||| | | || || |||| || | ||||| || | || |||||| |||||| Sbjct 73521 GCTTATCTTAGTATTTTTCACTACGACTTAATTGACTTTATTGACTGTAAAAAAATCAAT 73462 Query 54513 GCTGATGAAAAAGCCAGAATTCAATCTTTATCTATTGGATTAATT 54557 || |||||||| | ||||| ||| | | || || ||||||||| Sbjct 73461 GCAGATGAAAAGTCTAGAATCCAAACACTCTCAATAGGATTAATT 73417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591674026676672