Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= NC_024364.1 Length=131952 Score E Sequences producing significant alignments: (Bits) Value seq2540 87.8 2e-12 seq1848 84.2 2e-11 >seq2540 Length=9893 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 99379 TATTGGTCTGTAGCCAAGCGGTAAGGCAACGGATTTTGATTCCGTGATACGTTGGTTCGA 99438 |||||| |||||||||||||||||||||| ||| ||||| ||| |||| || |||||||| Sbjct 6415 TATTGGGCTGTAGCCAAGCGGTAAGGCAATGGACTTTGACTCCATGATGCGATGGTTCGA 6474 Query 99439 ATCCAACTAGACCAGC 99454 |||| | || ||||| Sbjct 6475 ATCCCTCCAGCCCAGC 6490 >seq1848 Length=83282 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 99381 TTGGTCTGTAGCCAAGCGGTAAGGCAACGGATTTTGATTCCGTGATACGTTGGTTCGAAT 99440 |||| |||||||||||||||||||||| ||| ||||| ||| |||| || |||||||||| Sbjct 81199 TTGGGCTGTAGCCAAGCGGTAAGGCAATGGACTTTGACTCCATGATGCGATGGTTCGAAT 81258 Query 99441 CCAACTAGACCAGC 99454 || | || ||||| Sbjct 81259 CCCTCCAGCCCAGC 81272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422061979149477