Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq101 170 4e-37
seq694 150 4e-31
seq292 149 1e-30
seq517 141 2e-28
seq695 140 6e-28
seq26 138 2e-27
seq84 118 2e-21
seq749 105 1e-17
seq216 105 1e-17
seq143 104 5e-17
seq108 104 5e-17
seq37 91.5 3e-13
seq12 89.7 1e-12
>seq101
Length=4626942
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| ||| ||||| | ||| ||||| || |||||||| || || ||||||||
Sbjct 1982296 CCACCCCTCAGACGAAGAACCAGGTGGAGAGTCGACTCTTTCTGGATGTTGTAATCAGAA 1982355
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| | | || ||||| || || || |||||||| || || || || || || || ||
Sbjct 1982356 AGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAAATAAGCCTCTGCTGGTCAGGGGGG 1982415
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||||||||| ||||| || || |||||||| || |||||| | || ||||||
Sbjct 1982416 ATGCCCTCCTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTATCACTGGGCTCTACT 1982475
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || |||||||| |||| ||||| || || ||||||||
Sbjct 1982476 TCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1982522
Score = 154 bits (170), Expect = 3e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| ||||| || | ||||| || || |||||||| || || ||||||||
Sbjct 1982980 CCACCCCTCAGGCGCAGGACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAA 1983039
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| | | || ||||| || || || || ||||| || || || || || || || ||
Sbjct 1983040 AGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGGG 1983099
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||||||||| ||||| || || |||||||| || || ||| | ||||| ||
Sbjct 1983100 ATGCCCTCCTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGTTCCACC 1983159
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
|||| || || |||||||| |||| ||||| || || |||||||||
Sbjct 1983160 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATT 1983207
>seq694
Length=814564
Score = 150 bits (166), Expect = 4e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||| || | || || || || || ||||| | | | | || ||||| |||||
Sbjct 212177 TGAAGAGTGGACTACTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGC 212236
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||||||||||||||| || ||||| ||||| |||||||||||||| ||||||||
Sbjct 212237 TTGCCAGCAAAGATTAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGAATCTTG 212296
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| ||||||||||| || ||||| ||||| || || | ||| || ||||| || ||
Sbjct 212297 GCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCAAGAGTGATGGTCTTCCCCGTT 212356
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
| || || || || ||||||||
Sbjct 212357 AGGGTTTTCACGAAAATCTGCAT 212379
>seq292
Length=3256830
Score = 149 bits (164), Expect = 1e-30
Identities = 162/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || |||||||| || || |||||||| ||||| |||||||| ||| | | ||
Sbjct 1957753 CGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAATCAGACAGAGTGCGGCCA 1957812
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| || ||||| || ||||| || || | || || || || || || || ||||||
Sbjct 1957813 TCTTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTA 1957872
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
||||| || || ||||| || || ||||| || ||| | || || || || | || ||
Sbjct 1957873 TCTTGGATTTTGGCTTTAACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATG 1957932
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| |||| ||||| ||||| ||||||||
Sbjct 1957933 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1957967
>seq517
Length=1171097
Score = 141 bits (156), Expect = 2e-28
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||| || || || || | || || | ||| | | | | || ||||| |||||
Sbjct 1142616 TGAAGAGTGGACTCCTTTTGAAAGTTGTAGTTAGACAAAGTACGTCCATCTTCCAGTTGC 1142557
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||||||||| ||||| || ||||| ||||| |||||||||||||| ||||||||
Sbjct 1142556 TTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGAATCTTG 1142497
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| ||||||||||| || ||||| ||||| || || | ||| || ||||| || ||
Sbjct 1142496 GCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGTCTTCCCCGTT 1142437
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
| || || || || ||||||||
Sbjct 1142436 AGGGTTTTCACGAAAATCTGCAT 1142414
>seq695
Length=815165
Score = 140 bits (154), Expect = 6e-28
Identities = 154/204 (75%), Gaps = 1/204 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||| || || || || || || || ||||| | | | | || ||||| ||| |
Sbjct 16886 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTGGC 16827
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||||||||| ||||| || ||||| ||||| |||||||||||||| ||||||||
Sbjct 16826 TTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGAATCTTG 16767
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| ||||||||||| || ||||| ||||| || || | ||| || ||||| || ||
Sbjct 16766 GCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGTCTTCCCCGTT 16707
Query 82788 AACGTCTT-TACAAATATCTGCAT 82810
| || || || || ||||||||
Sbjct 16706 AGGGTTTTCAACGAAAATCTGCAT 16683
>seq26
Length=7528108
Score = 138 bits (152), Expect = 2e-27
Identities = 155/207 (75%), Gaps = 3/207 (1%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTAC---CGTCTTCTAGT 82664
|| ||||| || || || || || || || ||||| | | | ||| | ||||| |||
Sbjct 6810791 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAGTACATCCATCTTCCAGT 6810732
Query 82665 TGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATC 82724
|| || ||||||||||| || || || ||||| ||||| |||||||||||||| ||||||
Sbjct 6810731 TGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATTCCTTCCTTATCCTGAATC 6810672
Query 82725 TTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCT 82784
|| || ||||||||||| || ||||| ||||| || | | ||| || ||||| ||
Sbjct 6810671 TTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTTGAGAGTGATGGTCTTCCCC 6810612
Query 82785 GTCAACGTCTTTACAAATATCTGCATT 82811
|| | || || | ||||||||||||
Sbjct 6810611 GTTAGGGTTTTCATGAATATCTGCATT 6810585
>seq84
Length=4826052
Score = 118 bits (130), Expect = 2e-21
Identities = 97/118 (82%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 82633 TATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTT 82692
||| |||||||| | | | | ||||| |||||||| |||||||||| ||||| ||
Sbjct 1438951 TATCATCAGATAAAGTACGTCTATCTTCCAGTTGTTTGGCAGCAAAGATCAGTCTCTGCA 1439010
Query 82693 GATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATC 82750
|||| ||||| |||||||||||||| ||||||||||| ||||||||||| || |||||
Sbjct 1439011 GATCAGGAGGAATTCCTTCCTTATCCTGAATCTTTGCCTTTACATTTTCTATTGTATC 1439068
>seq749
Length=741069
Score = 105 bits (116), Expect = 1e-17
Identities = 82/98 (84%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712
|| ||||| ||||| || |||||| |||| ||||| | ||||| ||||| |||||||||
Sbjct 338030 CCATCTTCCAGTTGCTTGCCAGCACAGATCAGTCTCGGCTGATCAGGAGGAATTCCTTCC 337971
Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATC 82750
||||| |||||||| || ||||||||||| || |||||
Sbjct 337970 TTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATC 337933
>seq216
Length=2856708
Score = 105 bits (116), Expect = 1e-17
Identities = 169/242 (70%), Gaps = 12/242 (5%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| ||||||| | |||||| | ||||| || || |||||| | ||| | ||||||
Sbjct 383035 TACCACCTCTCAGATACAGAACCAGGTGCAAGGTTGACTCTTTCCGGATACTGAAATCAG 383094
Query 82642 ATAGAATT---CTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTG 82698
| | | | | || ||||| || || || || |||||||| || |||| || | ||
Sbjct 383095 AAAAAGTGTGGCAGCCATCTTCCAGATGCTTGCCTGCAAAGATAAGCTTTTGCTGTTTTG 383154
Query 82699 -------GAGGT--ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTAT 82749
|||| || || || |||| ||||| || || || |||||||| || || |
Sbjct 383155 TGTGGCAGAGGGTAATGCCCTCTCTATCCTGAATATTGGCCTTCACATTTTCGATGGTGT 383214
Query 82750 CATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCA 82809
|| |||| || | |||| | || ||||||| ||||| ||||||||||| || ||||
Sbjct 383215 CACTAGGCTCCATCTCCAGGGCGATGGTCTTGCTAGTCAAGGTCTTTACAAAGATTTGCA 383274
Query 82810 TT 82811
||
Sbjct 383275 TT 383276
Score = 87.8 bits (96), Expect = 4e-12
Identities = 111/152 (73%), Gaps = 3/152 (2%)
Strand=Plus/Plus
Query 82587 CCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGA 82646
|| |||| | | ||||| ||||||||||| || ||| ||| | | |||||||| |||
Sbjct 382443 CCCCTCAGATGGAGAACCAAGTGCAGAGTTGACCCTTCCTGGA---TGTAATCAGAAAGA 382499
Query 82647 ATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATT 82706
| || ||||| || || | || |||||||| || || || || || || || ||
Sbjct 382500 GTGAGGCCATCTTCCAGCTGCCTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATG 382559
Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATT 82738
||||| |||||||| ||||| || || |||||
Sbjct 382560 CCTTCTTTATCTTGGATCTTAGCCTTCACATT 382591
>seq143
Length=3665815
Score = 104 bits (114), Expect = 5e-17
Identities = 107/139 (77%), Gaps = 1/139 (1%)
Strand=Plus/Minus
Query 82612 GAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTC 82671
|||| | ||||| || || || | ||||| ||| | | || |||| ||||| || |
Sbjct 1819747 GAGTGAACTCTTTTTGAATGTTGTG-TCAGACAGAGTACGTCCATCTTTCAGTTGCTTGC 1819689
Query 82672 CAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTT 82731
||| ||||| ||||| || ||||| ||||| |||||||||||||| |||||||| || |
Sbjct 1819688 CAGAGAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGAATCTTGGCCT 1819629
Query 82732 TTACATTTTCAATCGTATC 82750
||||| |||| || |||||
Sbjct 1819628 TTACAGTTTCTATTGTATC 1819610
>seq108
Length=4373546
Score = 104 bits (114), Expect = 5e-17
Identities = 147/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||| | || || || || | || || | ||| ||| || ||| | |||||
Sbjct 1070460 TGAAGAGTGGCCTCCTTTTGAATGCTGTAGTCCCACAGAGTTCGTCCATCTGCCAGTTGC 1070519
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||| ||||| | ||| || |||| ||||| |||||||||||||| || |||||
Sbjct 1070520 TTGCCAGCCAAGATCAATCTCTGCTGATTAGGAGGAATTCCTTCCTTATCCTGGATCTTG 1070579
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGG-TTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786
|| ||||| ||||| | |||| | ||| ||| | || | ||| || ||||| || ||
Sbjct 1070580 GCCTTTACGTTTTCTACTCTATC-TGAGGATTCAGCCTCAAGAGTGATGGTCTTCCCCGT 1070638
Query 82787 CAACGTCTTTACAAATATCTGCAT 82810
| || || ||||| ||||||||
Sbjct 1070639 AAGGGTTTTCACAAAAATCTGCAT 1070662
>seq37
Length=7442708
Score = 91.5 bits (100), Expect = 3e-13
Identities = 73/88 (83%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712
|||||||| ||||| || ||||| ||| | ||||| || ||||| |||| |||||||||
Sbjct 5921089 CCGTCTTCCAGTTGCTTGCCAGCCAAGTTCAGTCTCTGCTGATCACGAGGAATTCCTTCC 5921148
Query 82713 TTATCTTGAATCTTTGCTTTTACATTTT 82740
|| || |||||||| || ||||||||||
Sbjct 5921149 TTGTCCTGAATCTTGGCCTTTACATTTT 5921176
>seq12
Length=8826349
Score = 89.7 bits (98), Expect = 1e-12
Identities = 105/142 (74%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 82667 TTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726
|| ||||||||| ||||| ||||||| || | || | ||||| ||||| || ||
Sbjct 5434144 TTCTCCAGCAAAAATTAGATAGTGTTGATGAGGCAGGATGTCCTCCTTGTCTTGGATTTT 5434085
Query 82727 TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786
||||| ||||| ||||| || ||| | || | || || | || || |||||||||||
Sbjct 5434084 GGCTTTGACATTCTCAATGGTGTCACTGGGCTTGACCTCAAGGGTGATGGTCTTGCCTGT 5434025
Query 82787 CAACGTCTTTACAAATATCTGC 82808
|| ||||| ||||| ||||||
Sbjct 5434024 CAGGGTCTTCACAAAGATCTGC 5434003
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981681414308671
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |