Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq56 109 7e-19
seq1641 105 9e-18
seq762 105 9e-18
seq451 105 9e-18
seq26 105 9e-18
seq150 104 3e-17
seq1316 95.1 2e-14
seq534 89.7 7e-13
>seq56
Length=5723395
Score = 109 bits (120), Expect = 7e-19
Identities = 71/77 (92%), Gaps = 1/77 (1%)
Strand=Plus/Minus
Query 11726 CCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784
||||||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||
Sbjct 4249935 CCAGTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCG 4249876
Query 11785 ATTCCCCGACGAGGAGG 11801
||||||||||| |||||
Sbjct 4249875 ATTCCCCGACGGGGAGG 4249859
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 4249931 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 4249872
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 4249871 CCCGACGGGGAG 4249860
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 4252274 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 4252215
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 4252214 CCCGACGGGGAG 4252203
Score = 102 bits (112), Expect = 1e-16
Identities = 67/73 (92%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 4252274 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 4252215
Query 11789 CCCGACGAGGAGG 11801
||||||| |||||
Sbjct 4252214 CCCGACGGGGAGG 4252202
Score = 96.9 bits (106), Expect = 5e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 4252203 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 4252262
Query 139413 TACTAACGAGGAT 139425
|||||||||||||
Sbjct 4252263 TACTAACGAGGAT 4252275
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 4249860 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 4249919
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 4249920 TACTAACGAGGA 4249931
>seq1641
Length=265544
Score = 105 bits (116), Expect = 9e-18
Identities = 72/80 (90%), Gaps = 2/80 (3%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 201067 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 201008
Query 8718 CCCGACGAGGAG--CAGAGG 8735
||||||| |||| ||||||
Sbjct 201007 CCCGACGGGGAGTACAGAGG 200988
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 148859 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 148918
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 148919 CCCGACGGGGAG 148930
Score = 100 bits (110), Expect = 4e-16
Identities = 66/72 (92%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 148859 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 148918
Query 11789 CCCGACGAGGAG 11800
||||||| ||||
Sbjct 148919 CCCGACGGGGAG 148930
Score = 100 bits (110), Expect = 4e-16
Identities = 66/72 (92%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 201067 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 201008
Query 11789 CCCGACGAGGAG 11800
||||||| ||||
Sbjct 201007 CCCGACGGGGAG 200996
Score = 96.9 bits (106), Expect = 5e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411
||||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||
Sbjct 200995 ACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 201054
Query 139412 ATACTAACGAGGA 139424
|||||||||||||
Sbjct 201055 ATACTAACGAGGA 201067
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 148930 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 148871
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 148870 TACTAACGAGGA 148859
>seq762
Length=1166646
Score = 105 bits (116), Expect = 9e-18
Identities = 67/73 (92%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716
|||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 1143436 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 1143377
Query 8717 CCCCGACGAGGAG 8729
|||||||| ||||
Sbjct 1143376 CCCCGACGGGGAG 1143364
Score = 100 bits (110), Expect = 4e-16
Identities = 66/72 (92%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 1143435 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1143376
Query 11789 CCCGACGAGGAG 11800
||||||| ||||
Sbjct 1143375 CCCGACGGGGAG 1143364
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1143364 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1143423
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 1143424 TACTAACGAGGA 1143435
>seq451
Length=1369147
Score = 105 bits (116), Expect = 9e-18
Identities = 67/73 (92%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716
|||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 231032 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 230973
Query 8717 CCCCGACGAGGAG 8729
|||||||| ||||
Sbjct 230972 CCCCGACGGGGAG 230960
Score = 102 bits (112), Expect = 1e-16
Identities = 67/73 (92%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 231031 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 230972
Query 11789 CCCGACGAGGAGG 11801
||||||| |||||
Sbjct 230971 CCCGACGGGGAGG 230959
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 230960 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 231019
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 231020 TACTAACGAGGA 231031
>seq26
Length=7528108
Score = 105 bits (116), Expect = 9e-18
Identities = 67/73 (92%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716
|||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 4678896 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 4678955
Query 8717 CCCCGACGAGGAG 8729
|||||||| ||||
Sbjct 4678956 CCCCGACGGGGAG 4678968
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||||||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 6755911 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 6755970
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 6755971 CCCGACGGGGAG 6755982
Score = 102 bits (112), Expect = 1e-16
Identities = 67/73 (92%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 4678897 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 4678956
Query 11789 CCCGACGAGGAGG 11801
||||||| |||||
Sbjct 4678957 CCCGACGGGGAGG 4678969
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 4678968 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 4678909
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 4678908 TACTAACGAGGA 4678897
Score = 95.1 bits (104), Expect = 2e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 6755911 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 6755970
Query 11789 CCCGACGAGGAG 11800
||||||| ||||
Sbjct 6755971 CCCGACGGGGAG 6755982
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| | |||||||||||||||| | |||| |||||||| |||||||||
Sbjct 6755982 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 6755923
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 6755922 TACTAACGAGGA 6755911
>seq150
Length=4781790
Score = 104 bits (114), Expect = 3e-17
Identities = 68/75 (91%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 1975076 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1975135
Query 8718 CCCGACGAGGAGCAG 8732
||||||| |||| ||
Sbjct 1975136 CCCGACGGGGAGAAG 1975150
Score = 100 bits (110), Expect = 4e-16
Identities = 66/72 (92%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 1975076 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1975135
Query 11789 CCCGACGAGGAG 11800
||||||| ||||
Sbjct 1975136 CCCGACGGGGAG 1975147
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1975147 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1975088
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 1975087 TACTAACGAGGA 1975076
>seq1316
Length=240920
Score = 95.1 bits (104), Expect = 2e-14
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand=Plus/Minus
Query 11726 CCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784
||||||||||||||||||||||| ||||| || | ||||| | |||||||| |||||||
Sbjct 15916 CCAGTCCTCGTTAGTATAGTGGTGAGTATCCCTGCCTGTCACGTGGGAGACCTGGGTTCG 15857
Query 11785 ATTCCCCGACGAGGAGG 11801
||||||||||| |||||
Sbjct 15856 ATTCCCCGACGGGGAGG 15840
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| || | ||||| | |||||||| |||||||||||
Sbjct 15912 TCCTCGTTAGTATAGTGGTGAGTATCCCTGCCTGTCACGTGGGAGACCTGGGTTCGATTC 15853
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 15852 CCCGACGGGGAG 15841
>seq534
Length=1522626
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||| | ||| ||||| |||||||||||||||||||||
Sbjct 1339892 TCCTCGTTAGTATAGTGGTGAGTCTCCCCACCTGTCATGCGGGAGACCGGGGTTCGATTC 1339951
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 1339952 CCCGACGGGGAG 1339963
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||| | ||| ||||| |||||||||||||||||||||
Sbjct 1339892 TCCTCGTTAGTATAGTGGTGAGTCTCCCCACCTGTCATGCGGGAGACCGGGGTTCGATTC 1339951
Query 11789 CCCGACGAGGAGG 11801
||||||| |||||
Sbjct 1339952 CCCGACGGGGAGG 1339964
Score = 82.4 bits (90), Expect = 1e-10
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| |||| ||||| | | |||||||
Sbjct 1339963 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCATGACAGGTGGGGAGACTCACCACTA 1339904
Query 139413 TACTAACGAGGAT 139425
|||||||||||||
Sbjct 1339903 TACTAACGAGGAT 1339891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 652750227270160
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