Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq292 149 6e-31
seq101 131 2e-25
seq376 104 2e-17
seq1820 102 8e-17
seq9 93.3 4e-14
seq63 89.7 5e-13
seq86 82.4 7e-11
>seq292
Length=3256830
Score = 149 bits (164), Expect = 6e-31
Identities = 161/208 (77%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||||||||||||||| ||||||||||| || ||| | | | || || ||
Sbjct 1957762 AAGTGCAGGGTGGACTCTTTCTGGATATTGTAATCAGACAGAGTGCGGCCA-TCTTCCAG 1957820
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||| |||||||| |||| || |||||||||||||| |||||||| ||||| || |||
Sbjct 1957821 CTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCTTGGAT 1957880
Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| |||| | | | ||||| ||||| ||||||| || |||| ||||| ||| ||||
Sbjct 1957881 -TTTGGCTTTAACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGC 1957939
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| ||||| || || || || ||||||||
Sbjct 1957940 CCGTCAGGGTCTTCACAAAGATCTGCAT 1957967
>seq101
Length=4626942
Score = 131 bits (144), Expect = 2e-25
Identities = 150/199 (75%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||||||||| || |||||||| | ||| | | | || || |||||||||||
Sbjct 1982554 GTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGCC 1982612
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| |||| |||| ||||||||| || |||||||| ||||| || |||||| |||
Sbjct 1982613 GGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTT 1982672
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | ||||| |||| ||||| || | ||||| ||| ||||||||||| ||
Sbjct 1982673 CACATTTTCGATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGT 1982732
Query 133643 TTTTACGAAAATCTGCATG 133661
|| ||||| |||||||||
Sbjct 1982733 CTTCACGAAGATCTGCATG 1982751
Score = 131 bits (144), Expect = 2e-25
Identities = 154/206 (75%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | |||||||||||| || || |||||||| | ||| | | | || || ||||
Sbjct 1982775 ATGCAGGGTGGACTCTTTTTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCT 1982833
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| || |||| |||| ||||||||| || |||||||| ||||| || |||||
Sbjct 1982834 GCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCT 1982893
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | || | |||||| |||| ||||| || | ||| | ||| |||||||
Sbjct 1982894 TGGCCTTCACATTTTCGATGGTGTCGCTGGGTTCCACTTCCAGGGTTATGGTCTTGCCGG 1982953
Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661
|||| || || ||||| |||||||||
Sbjct 1982954 TCAGGGTCTTCACGAAGATCTGCATG 1982979
Score = 129 bits (142), Expect = 6e-25
Identities = 153/205 (75%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||||||||| || |||||||| | ||| | | | || || ||||
Sbjct 1983003 ATGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCT 1983061
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| || |||| |||| ||||||||| || |||||||| ||||| || |||||
Sbjct 1983062 GCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGGATCT 1983121
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | || | ||||| |||| ||||| || | ||||| ||| ||||| |
Sbjct 1983122 TGGCCTTCACATTTTCGATGGTGTCACTGGGTTCCACCTCCAGGGTGATGGTCTTGCCAG 1983181
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
|||| || || ||||| ||||||||
Sbjct 1983182 TCAGGGTCTTCACGAAGATCTGCAT 1983206
Score = 122 bits (134), Expect = 8e-23
Identities = 148/199 (74%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||||||||| || |||||||| | ||| | | | || || |||||||||||
Sbjct 1982326 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGCC 1982384
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| |||| |||| ||||||||| || |||||||| ||||| || |||||| |||
Sbjct 1982385 AGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGGATCTTGGCCTT 1982444
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | || || ||||||| || || | ||||| ||| ||||||||||| ||
Sbjct 1982445 CACATTTTCGATGGTATCACTGGGCTCTACTTCTAGGGTGATGGTCTTGCCGGTCAGGGT 1982504
Query 133643 TTTTACGAAAATCTGCATG 133661
|| ||||| |||||||||
Sbjct 1982505 CTTCACGAAGATCTGCATG 1982523
>seq376
Length=1707047
Score = 104 bits (114), Expect = 2e-17
Identities = 151/208 (73%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||||||||||||||| ||||||||||| || ||| | | | | || ||
Sbjct 762729 AAGTGCAGGGTGGACTCTTTCTGAATATTGTAATCTAACAGAGTGTGGCCA-TGTTCTAG 762671
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||| |||| || | | || ||||| ||||| ||| |||||| || ||||| |||
Sbjct 762670 CTGTTTGCTGGCAAAGGTCAGACGCTGTTGGTCAGGAAAGATGCCCTCGTTGTCTCGGAT 762611
Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| || |||| | ||||| |||||| |||||| | |||| ||||| ||| ||||
Sbjct 762610 -TTTAGCTTTGACGTTCTCAATGGTGTCGCTGGGCTTGGCCTCGAGGGTGATGGTCTTGC 762552
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| |||| || || || || ||||||||
Sbjct 762551 CCATCAGGGTCTTCACAAAGATCTGCAT 762524
>seq1820
Length=90317
Score = 102 bits (112), Expect = 8e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||||||||| | |||||||| | ||| | | | || || |||||||||||
Sbjct 66951 GTCGACTCTTTCTGGAGGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGCC 66893
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || |||| |||||||||||| |||||| || || || |||||| |||
Sbjct 66892 GGCAAAGATAAGCCTCTGCTGGTCGGGGCGGATGCACTCTTTATCTTGGATCTTGGCCTT 66833
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| || | ||||| |||| ||||| || | ||||| ||| ||||| ||||| ||
Sbjct 66832 CACAGTTTCGATTGTGTCACTGGGTTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGTGT 66773
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||||||||||||
Sbjct 66772 CTTCACGAAAATCTGCAT 66755
>seq9
Length=9398461
Score = 93.3 bits (102), Expect = 4e-14
Identities = 113/153 (74%), Gaps = 1/153 (1%)
Strand=Plus/Plus
Query 133509 TCGAGCTGCTTGCCCGC-GTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567
|| ||||||||||| | | ||||||||| ||| ||||| | ||| |||| || || ||
Sbjct 525155 TCCAGCTGCTTGCCTGGTGGAAATGAGCCTCTGTTGGTCAGCGGGGCTGCCCTCTTTATC 525214
Query 133568 GGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGT 133627
|||||| ||| | | || | ||||| |||||||||| || | ||||| |||
Sbjct 525215 TTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 525274
Query 133628 TTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||||||||| || || ||||| |||||||
Sbjct 525275 CTTGCCGGTCAGGGTCTTCACGAAGCTCTGCAT 525307
>seq63
Length=7304539
Score = 89.7 bits (98), Expect = 5e-13
Identities = 141/197 (72%), Gaps = 4/197 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||||||||| ||||||| || || ||| | |||||| || | ||||||
Sbjct 4206573 GTGGACTCTTTCTGGCTATTGTAGTCTGACACAGTGCGC-TGTCCTCTGGCGGTTTGCCC 4206515
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-TT 133582
|| |||| | ||||||| | | || |||||||| |||||||| ||| ||| || ||
Sbjct 4206514 GCAAAAATCCGACGCTGCTAGGCAGGCGGGATGCCCTCCTTGTCTTGGAT-TTTGGCTTT 4206456
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| || |||| || | |||| | ||| || | ||||| ||| ||||| | || ||
Sbjct 4206455 GATCTTCTCAGTGATGCCACTGGGGT-CACCTCAAGGGTGATGGTCTTGCCAGCTAGGGT 4206397
Query 133643 TTTTACGAAAATCTGCA 133659
| || ||||||||||
Sbjct 4206396 CTCCACAAAAATCTGCA 4206380
>seq86
Length=5199016
Score = 82.4 bits (90), Expect = 7e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 148866 TACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTG 148925
|||||||| || || | |||||| ||||||||||||||| |||| ||||| || |||
Sbjct 130216 TACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTGGTTG 130275
Query 148926 CTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGG 148963
||||| | || || | || ||||| |||||||||||
Sbjct 130276 CTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGG 130313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483350770454360
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